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PLM4_5_b1_sep16_scaffold_7162

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_7162_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..184)
DNA (183bp) protein (61aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(184..1836)
DNA (1653bp) protein (551aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_5_b1_sep16_scaffold_7162_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1851..2984)
DNA (1134bp) protein (378aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZF0_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_4
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

Not on your lists

comp(3012..3599)
DNA (588bp) protein (196aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00036EE635
Type A von Willebrand factor domain-containing protein {ECO:0000313|EMBL:EFA81954.1}; species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_7162_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3699..4628)
DNA (930bp) protein (310aa)
Peptidase M50, putative membrane-associated zinc metallopeptidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW61_RUBXD
peptidase M50 membrane-associated zinc metallopeptidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4646..4855)
DNA (210bp) protein (70aa)
peptidase Tax=Spirosoma spitsbergense RepID=UPI00035F411B
peptidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4852..5904)
DNA (1053bp) protein (351aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI00037D69B7
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5901..6707)
DNA (807bp) protein (269aa)
Phosphatidate cytidylyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6704..7234)
DNA (531bp) protein (177aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7335..7895)
DNA (561bp) protein (187aa)
Ribosome-recycling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7892..8659)
DNA (768bp) protein (256aa)
uridylate kinase (EC:2.7.4.22)
uridylate kinase Tax=Patulibacter americanus RepID=UPI0003B4720C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8659..9462)
DNA (804bp) protein (268aa)
Elongation factor Ts Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0R2_HALNC
translation elongation factor Ts
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(9459..10292)
DNA (834bp) protein (278aa)
30S ribosomal protein S2 Tax=Desulfurispora thermophila RepID=UPI00037E4013
rpsB; ribosomal protein S2
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_7162_14
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10460..11404
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL37616.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
response receiver sensor diguanylate cyclase
Response receiver sensor diguanylate cyclase bin=GWC2_Deltaproteobacteria_55_46 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
PLM4_5_b1_sep16_scaffold_7162_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11401..12048)
DNA (648bp) protein (216aa)
pseudouridine synthase Tax=Patulibacter americanus RepID=UPI0003B6EE4D
pseudouridine synthase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 15 items

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