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PLM4_5_b1_sep16_scaffold_2609

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2609_1
unknown

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3..635
DNA (633bp) protein (211aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2609_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(659..1423)
DNA (765bp) protein (255aa)
TonB family protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWL9_CHLT3 bin=16ft_combo_ws3_JS1 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TonB family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2609_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(1420..2472)
DNA (1053bp) protein (351aa)
YkuD domain protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP51_IGNAJ
YkuD domain-containing protein
YkuD domain protein {ECO:0000313|EMBL:AFH50758.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM4_5_b1_sep16_scaffold_2609_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2487..3863)
DNA (1377bp) protein (459aa)
Aspartokinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INQ8_KORVE bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aspartate kinase III
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2609_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3990..4499
DNA (510bp) protein (170aa)
Microcystin dependent protein MdpB Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q093D2_STIAD
Microcystin dependent protein {ECO:0000313|EMBL:AKF79208.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
phage tail collar domain-containing protein
PLM4_5_b1_sep16_scaffold_2609_6
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4496..5113
DNA (618bp) protein (206aa)
Tail Collar domain protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4P7_HALH1
Tail collar protein {ECO:0000313|EMBL:EWT02091.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Tail Collar domain-containing protein
PLM4_5_b1_sep16_scaffold_2609_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5110..5751
DNA (642bp) protein (214aa)
Phage tail collar domain-containing protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBB7_MYXFH
phage tail collar domain-containing protein
Phage tail collar domain-containing protein {ECO:0000313|EMBL:AEI63324.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM4_5_b1_sep16_scaffold_2609_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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5748..6920
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B48F6F
5'-nucleotidase domain-containing protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM4_5_b1_sep16_scaffold_2609_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6995..7336
DNA (342bp) protein (114aa)
heavy metal transport/detoxification protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Heavy metal transport/detoxification protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_2609_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7378..8211
DNA (834bp) protein (278aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
heavy metal translocating P-type ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 10 items

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