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PLM4_5_b1_sep16_scaffold_713

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_713_1
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..491)
DNA (489bp) protein (163aa)
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ADB18009.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ADB18009.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
MCP methyltransferase, CheR-type Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QXT2_PIRSD
PLM4_5_b1_sep16_scaffold_713_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(488..1555)
DNA (1068bp) protein (356aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099, ECO:0000256|SAAS:SAAS00070601};; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
Chemotaxis response regulator protein-glutamate methylesterase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7V1_GEOOG
response regulator receiver modulated CheB methylesterase
PLM4_5_b1_sep16_scaffold_713_3
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1567..1950)
DNA (384bp) protein (128aa)
Response regulator receiver protein Tax=Rhodopirellula europaea 6C RepID=M2ADJ9_9PLAN
Response regulator receiver protein {ECO:0000313|EMBL:EMB15165.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
response regulator receiver protein, CheY
PLM4_5_b1_sep16_scaffold_713_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1981..2415)
DNA (435bp) protein (145aa)
Chemotaxis signal transduction protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RV23_BLASD
cheW; Chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:CCG05742.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM4_5_b1_sep16_scaffold_713_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..4448)
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
Chemotaxis protein CheA Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMA1_CORCM
cheA1; chemotaxis protein CheA
PLM4_5_b1_sep16_scaffold_713_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..5420
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Ralstonia RepID=B2U9K3_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27639.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
PLM4_5_b1_sep16_scaffold_713_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5454..6062)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCP4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88158.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_713_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6110..8179)
DNA (2070bp) protein (690aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYS5_CALAS bin=16ft_combo_ws3_JS1 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_713_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8208..8570)
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG10_ANADF
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_5_b1_sep16_scaffold_713_10
unknown

Not on your lists

8687..9151
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_713_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(9159..9674)
DNA (516bp) protein (172aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
PLM4_5_b1_sep16_scaffold_713_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9868..11733
DNA (1866bp) protein (622aa)
Uncharacterized protein Tax=Bacteroides sp. 2_1_33B RepID=D0TI74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ84468.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_713_13
unknown

Not on your lists

11847..12206
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_713_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12319..12774
DNA (456bp) protein (152aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PLL2_9ZZZZ bin=16ft_combo_ws3_JS1 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_713_15
unknown

Not on your lists

12898..12996
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_713_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13025..13756)
DNA (732bp) protein (244aa)
alias=16ft_combo_ws3_scaffold_2317_10 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_713_17
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13956..15074
DNA (1119bp) protein (373aa)
Leucyl aminopeptidase (Aminopeptidase T) Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EGQ1_THECK
leucyl aminopeptidase
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:AGA58330.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
PLM4_5_b1_sep16_scaffold_713_18
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

15082..16635
DNA (1554bp) protein (518aa)
Tax=CG_Arma_01
PLM4_5_b1_sep16_scaffold_713_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16639..18348)
DNA (1710bp) protein (570aa)
Putative uncharacterized protein (Fragment) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Selaginella moellendorffii genus=Selaginella taxon_order=Selaginellales taxon_class=Isoetopsida phylum=Streptophyta tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_713_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18479..20467
DNA (1989bp) protein (663aa)
ABC transporter, ATP-binding protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2X8_PELCD bin=16ft_combo_ws3_JS1 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_713_21

Not on your lists

comp(20331..22247)
DNA (1917bp) protein (639aa)
FG-GAP repeat protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXD0_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:KKT53273.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
FG-GAP repeat-containing protein
PLM4_5_b1_sep16_scaffold_713_22
unknown

Not on your lists

comp(22362..22595)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 22 items

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