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PLM4_5_b1_sep16_scaffold_914

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_914_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3..1520
DNA (1518bp) protein (506aa)
id=5225723 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

1954..3153
DNA (1200bp) protein (400aa)
Na+/proline symporter Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKE8_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Na+/proline symporter
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3153..5513
DNA (2361bp) protein (787aa)
TonB-dependent receptor plug Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKF0_IGNAJ bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TonB-dependent receptor plug
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_4
unknown

Not on your lists

comp(5572..6948)
DNA (1377bp) protein (459aa)
id=24595422 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PLM4_5_b1_sep16_scaffold_914_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7012..7779)
DNA (768bp) protein (256aa)
protein phosphatase 2C-like protein; K01090 protein phosphatase [EC:3.1.3.16] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
phosphoprotein phosphatase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7847..8785)
DNA (939bp) protein (313aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ53_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8928..9593
DNA (666bp) protein (222aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_8
unknown

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9728..10309
DNA (582bp) protein (194aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_914_9

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10306..11397
DNA (1092bp) protein (364aa)
Putative uncharacterized protein bin=GWA1_ZB2_49_26 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW09254.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_914_10
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11408..11890
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Marinobacter santoriniensis NKSG1 RepID=M7CMU7_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EMP54489.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_914_11
unknown

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11945..12496
DNA (552bp) protein (184aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_914_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

12602..13600
DNA (999bp) protein (333aa)
Cyclic pyranopterin monophosphate synthase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJT6_NOCSJ
moaA; molybdenum cofactor biosynthesis protein A
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13616..14920
DNA (1305bp) protein (435aa)
cytochrome BD ubiquinol oxidase subunit I Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
cytochrome bd-type quinol oxidase subunit 1
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_5_b1_sep16_scaffold_914_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14922..15932
DNA (1011bp) protein (337aa)
qxtB; terminal oxidase subunit II (EC:1.10.3.-)
Probable terminal oxidase subunit II {ECO:0000313|EMBL:CAN92597.1}; EC=1.10.3.- {ECO:0000313|EMBL:CAN92597.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
cytochrome BD ubiquinol oxidase subunit II Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5371E
PLM4_5_b1_sep16_scaffold_914_15
unknown

Not on your lists

15929..16831
DNA (903bp) protein (301aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_914_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

17567..19069
DNA (1503bp) protein (501aa)
id=5225570 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19203..20294)
DNA (1092bp) protein (364aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158) bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_914_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20643..21005)
DNA (363bp) protein (121aa)
id=24533225 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_5_b1_sep16_scaffold_914_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(21002..21619)
DNA (618bp) protein (206aa)
flavin reductase domain-containing FMN-binding protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Paenisporosarcina sp. TG20 genus=Paenisporosarcina taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_5_b1_sep16_scaffold_914_20
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21680..21967)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JT41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKF81031.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
protein of unknown function DUF1330
PLM4_5_b1_sep16_scaffold_914_21
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21980..22990)
DNA (1011bp) protein (337aa)
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:BAJ64728.1}; EC=3.5.4.4 {ECO:0000313|EMBL:BAJ64728.1};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
adenosine deaminase Tax=Aeromonas caviae RepID=UPI0002197F02
PLM4_5_b1_sep16_scaffold_914_22
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23070..24428
DNA (1359bp) protein (453aa)
Major facilitator superfamily MFS_1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTV4_9BACT
major facilitator superfamily transporter
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_5_b1_sep16_scaffold_914_23
unknown

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24471..24743
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_914_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

24755..25921
DNA (1167bp) protein (389aa)
Peptidase M48 Ste24p Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3M6_POLGS bin=16ft_combo_ws3_JS1 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M48 Ste24p
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 24 items

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