ggKbase home page

PLM4_5_b1_sep16_scaffold_597_9

Organism: PLM4_5_b1_sep16_Eisenbacteria_68_23

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(10280..11815)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=SYK_MOOTA bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 507.0
  • Bit_score: 743
  • Evalue 7.90e-212
lysyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 491.0
  • Bit_score: 512
  • Evalue 1.10e-142
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 507.0
  • Bit_score: 743
  • Evalue 1.10e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1536
ATGTCGCTCGAAGTCCTGATGGCGCAACGCCGCGAGAAGCTTGCCCAGTGGCAGGCGCTCGGGCTGCCGGCGTACGCGTACTCGTACGACGCCACCCATCACGCGGCCGACCTGCTGGCGCTCGGCGAAGCGGTGACCGAGACCCCGGGCGAGCGGGTCCGGATCGCCGGCCGGCTGGTGACCATGCGCGGGCACGGCAAGGCCGGCTTCGCCCACGTGCTCGACGGGACCGGCCGCATCCAGGTCTACTTCCGTGCCGATCAGCTGGGCGAGCAGTTCCAGCGCTACGAGCTGCTCGATGTCGGCGACTGGGTGGGCGTCGAGGGGCCGCTGTTCCGCACCCGGACCGGCGAGATCACGGTGCGTGCCGACGGGGTCGAGATGCTGGCCAAGGCGCTGCGCCCGATGCCCGAGAAGTGGCACGGGCTGCGCGATCCCGAGACCCGCTATCGCCAGCGCTACGCCGACCTGTTCATGAATCTCGAGGTGCGCAAGGTGTTCCGCACGCGCGCGGGGCTGAACTCGGCGATCCGCGGGTTCCTCGATGCGCGCGGCTTTCTCGAGGTCGAGACTCCGGTGCTCCAGCCGCTCTACGGCGGCGCATTCGCGCGTCCGTTCGTGACCCGGCACAACGCGCTCGACATGGAGCTCTACCTGCGGATCTCGAACGAGCTCTATCTCAAGCGTCTGATCGTGGGCGGGCTCGAGCGCGTGTACGAGTTCTCGCGCGACTTCCGCAACGAGGGGATGGACCGCTCGCACAATCCCGAGTTCACGATCCTCGAGTACTACCAGGCGTTCGCCGACGTTCACACGATGATGGACGTGACCGAGGCGCTGTTCGTTCACGCTCTCACCCACGCGACCGGTGGCCCGGTCGTCCCCTACCAGGGCGAGATGCTCGATTTCACGCCGCCATGGCCGCGGGTCTCGATGCTCGACTCGGTGAGCGAAAAGGTGGGGGAGAGCGTTCACGATCTCGACCCCGGCAAGCTCCGGCGGCTGGTCGAAAAGCATGGCTTCCAGGTGCGGCCCGGCACCGGCGCGGGCGGTCTGCTCGACGAGCTGTTCACCGAGCTGGTGCAGCCGACCCTCGTGCAGCCGTGTTTCCTGATCGACTTCCCGCGCGAGACCTCGCCGCTCGCGCGCGTGAGCCGCACCAACCCGGCGGTGGTCGAGCGCTTCGAAGTGTTCGCGGCCGGCATGGAGCTGGCGAACGCGTTCTCCGAGCAGAACGACGCCGACGCGCAGCGCGCGGCGTTCGAGCAGCAGGTCGCCCGCCGCGCGGGCGGCGATGACGAGGCGCAGCCGCTCGACCAGGACTACCTGCGCGCGCTCGAGTACGGGATGCCGCCGACCGGCGGGGTCGGGATCGGCTTCGACCGGCTGGTGATGGTGGCGACCGACTCGCGGTCGGTCCGCGACGTGCTCCTGTTCCCGCAGCTCCGTCCCGAGGAGGGACGGTCCGAGCCGCACGACGAAGACGAGGTCGAAGCCGGCGCAGCGGAGGGCGGCCCGCCCGGGGCCGCGCGTTGA
PROTEIN sequence
Length: 512
MSLEVLMAQRREKLAQWQALGLPAYAYSYDATHHAADLLALGEAVTETPGERVRIAGRLVTMRGHGKAGFAHVLDGTGRIQVYFRADQLGEQFQRYELLDVGDWVGVEGPLFRTRTGEITVRADGVEMLAKALRPMPEKWHGLRDPETRYRQRYADLFMNLEVRKVFRTRAGLNSAIRGFLDARGFLEVETPVLQPLYGGAFARPFVTRHNALDMELYLRISNELYLKRLIVGGLERVYEFSRDFRNEGMDRSHNPEFTILEYYQAFADVHTMMDVTEALFVHALTHATGGPVVPYQGEMLDFTPPWPRVSMLDSVSEKVGESVHDLDPGKLRRLVEKHGFQVRPGTGAGGLLDELFTELVQPTLVQPCFLIDFPRETSPLARVSRTNPAVVERFEVFAAGMELANAFSEQNDADAQRAAFEQQVARRAGGDDEAQPLDQDYLRALEYGMPPTGGVGIGFDRLVMVATDSRSVRDVLLFPQLRPEEGRSEPHDEDEVEAGAAEGGPPGAAR*