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PLM4_5_b1_sep16_scaffold_1492_6

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 4750..6309

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XJ22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 307.0
  • Bit_score: 213
  • Evalue 2.90e-52
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF60249.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 307.0
  • Bit_score: 213
  • Evalue 4.10e-52
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 255.0
  • Bit_score: 186
  • Evalue 1.40e-44

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1560
ATGCGTAGCGATTTCGACTTGCTTAGAGAATACGTGGATAGCGCTTCTGAATCGGCGTTTAATATGCTGGTCGAGAAGTATCTTCAGCTTGTGTACTCCACCGCGTTGCGTCAGGTCCGGGACCCGCATCTGGCCCAGGACGTATCTCAGGCTGTGTTTATCATCCTGGCTCGAAAAGCTCGCACCCTTCGAAAGGACACGCTGTTGAGCGGATGGCTTTACCGCACAACTTGCTTCGCCGCAGCCGATACGATGAAAAAACAGCGCCGCCGGGAATTTCACGAGCAGCAGTCACCAGCCCTTGCGGCTACAACAGATGATTCATCCGAAACAGAACCCACTACCGCCTTACTGGATGAAGCAATCGCGTCTCTCCGCGAAAAGGATCGGGCTGCGATCATTCTGCGCTTCTTCCAAAACAAGCCCCTTGCCGAAGTGGGCGGCGCTTTGGGCCTGACCGAAGATGCCGCCAGAATGCGAGTATCGAGGGCTTTGGAACATCTAAGAAAGCTCTTGGCCCTGCGCAAAGTCGCGCTTCCGGCTGGCACAATAATGACCCTGTTGGCTGGACAGACAGCACATGCCGCCCCGGTTGGCCTGGCCACTTCGGTGAAAGCAATGGCAGCGGCGAAGGCGGGCGCTGGCGCTGCTGCTGCGGCCACTATCGCAGAAGCTACCCTGAAGACTCTGGGATGGTTGAAAGTCAAAACCGGAGCCTATGTATGTGGCGGCATCGTGCTTGCCGCCATAACCGCGGACATATTGGTCAACGGGTCTGCATCCCGCGCATGGCCGCTAGGCGGCGGGCTCCGCTACGAGGTTGCGGGAACTCTCCGTGTCGTCCCCGCAACCGGAGGCGCCGCCGGCACAGCCAACGAGGGCAATGAATTTCAGATGCAGATGAAGCGAGGAGTCTGGAGCCTGAAGTTGGATTTTTCCATGGATACTAACCGGAATCCGGTGGTTTATGAATACGACGGATCAAGACTTGCTTACTACGCCGAGCGGGCCACAACTCGGCACGTGATCGAAGGCTCTCCCGCTGTATCCAATCTGGTTGCCCATTCCATTGGCGACGCAGACTGGGCTTTGTTTGCTGCGTGCCTTCACCTGTATTTCTTCGACCTTACGAATAGCTGGGCTTGGCCGCGCACCCTGCCCTCAACGCCCAATTCACTGGTGACGCATGCAGTTGCCATGGAGTGGTGGGCCCTGCCACCGGGAACGTTTCCCGGCGACATTTGGTTTTTCGATTCGGGATTTCCCTCCCTGGCAGAGGATGGGTCCGTGAGAACAGAGCCCCTCCCGCCGCCTTTCAGCGGTATGTCAGTCCTTGGCGGTCATCTCTTTGTGGGCCCGTTCACGAACGCCGACTCGCCGTCTATGCCCATGTCCTTTCGCTACGACCGGCTCTTGCTCCGACCCGATGCCAGGACAACCAATGACGTTTACCGGGTCCTCTCCGTGGAAGGAGTGGTCTCGAAACTGCAAACAAACCAAAAACGTCGCCTCGACGACCGAGCGAGAAAACAAGCACATGAACAGAATAGATCCATGTGA
PROTEIN sequence
Length: 520
MRSDFDLLREYVDSASESAFNMLVEKYLQLVYSTALRQVRDPHLAQDVSQAVFIILARKARTLRKDTLLSGWLYRTTCFAAADTMKKQRRREFHEQQSPALAATTDDSSETEPTTALLDEAIASLREKDRAAIILRFFQNKPLAEVGGALGLTEDAARMRVSRALEHLRKLLALRKVALPAGTIMTLLAGQTAHAAPVGLATSVKAMAAAKAGAGAAAAATIAEATLKTLGWLKVKTGAYVCGGIVLAAITADILVNGSASRAWPLGGGLRYEVAGTLRVVPATGGAAGTANEGNEFQMQMKRGVWSLKLDFSMDTNRNPVVYEYDGSRLAYYAERATTRHVIEGSPAVSNLVAHSIGDADWALFAACLHLYFFDLTNSWAWPRTLPSTPNSLVTHAVAMEWWALPPGTFPGDIWFFDSGFPSLAEDGSVRTEPLPPPFSGMSVLGGHLFVGPFTNADSPSMPMSFRYDRLLLRPDARTTNDVYRVLSVEGVVSKLQTNQKRRLDDRARKQAHEQNRSM*