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PLM4_5_b1_sep16_scaffold_2920_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(5758..6675)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PN43_KRIFD similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 198.0
  • Bit_score: 171
  • Evalue 9.70e-40
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 198.0
  • Bit_score: 171
  • Evalue 2.70e-40
DsaQ {ECO:0000313|EMBL:AJW76719.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scopuliridis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 251.0
  • Bit_score: 171
  • Evalue 1.40e-39

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Taxonomy

Streptomyces scopuliridis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
GTGCGGGTTACACCATTCAGCTTGGAAATTCAGACGGACAGCCTGAGCGGGAACAAGTGCAGCTGGGGCTATTACGCGGTGAAGGAGTCGCAGGACTCGTGTTCATTGCCGGGAACCGCCCGTCGGCGAACTACGATATCCTTCAAAGCTGGGATATCCCGGTGGTGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTTTGGAAGTGGATCTAGTCTGCGCGGACAATCGGGAAGGAATGCGCGAAGCTGTGGTCCATTTATTGTCCCTGGGCCACCAGGACATCGCGATAATTACCGGTCCTGCGGGAATCGACGTTGCTGAGGAGCGCCTGGGCGGGTATCGGGACGCTTTGCTGAACGCGGGGATGACGCTGCGGAAATCCTTCGTTATCCACACCGATTTTGGGCAGGAGGGCGGTTATGCATCGATGGCGAGGTTATTGGACATGGGGAAGCCGCCGAGGGCGGTGGTGGTGGCCAACAACCTGATGACGTTGGGGGCGCTTCAGGCCATGGAGGAGCGACATGTTCGCATTCCGGAAGACATGGCCCTAGTCGCGTTCGATGACATGCCGTGGGCGGCCTTTCTTCGCCCGCCTCTCACCGCGGTGGCGCAACCGGCGGAGGATCTCGGGCGGGCCGCGGCTCAACTGTTGTTGGAACGGCTGAAGGATCCTCAGAGAATGGTCCGGCGTGTGGTCTTACCCACGCGGTTGGAGGTGAGGGCTTCGTGTGGTGCGCGCCTCGCCGCGGAAGCCCGGTGCCCGCAGGAACCGCCTCGGAAGGAGACGGAGGGGGTTACGAAACAAACCGGCCGCGCTTTGAATCCGAAAGCAACCACAGTTGGAAATCGTGCGCCGCTGCAGGCTCGTGCGAGCGCTCGAGCAGCCCAGACCCTGACTGCGGGAACCTAG
PROTEIN sequence
Length: 306
VRVTPFSLEIQTDSLSGNKCSWGYYAVKESQDSCSLPGTARRRTTISFKAGISRWWPXXXXXXXXXGLEVDLVCADNREGMREAVVHLLSLGHQDIAIITGPAGIDVAEERLGGYRDALLNAGMTLRKSFVIHTDFGQEGGYASMARLLDMGKPPRAVVVANNLMTLGALQAMEERHVRIPEDMALVAFDDMPWAAFLRPPLTAVAQPAEDLGRAAAQLLLERLKDPQRMVRRVVLPTRLEVRASCGARLAAEARCPQEPPRKETEGVTKQTGRALNPKATTVGNRAPLQARASARAAQTLTAGT*