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PLM4_5_b1_sep16_scaffold_3985_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 2251..4413

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 723.0
  • Bit_score: 1169
  • Evalue 0.0
Sugar-phosphate isomerase, RpiB/LacA/LacB family Tax=Pedosphaera parvula Ellin514 RepID=B9XPG3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 723.0
  • Bit_score: 1169
  • Evalue 0.0
glyA; protein-tyrosine-phosphatase, ribose 5-phosphate isomerase and glycine/serine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 736.0
  • Bit_score: 763
  • Evalue 5.00e-218

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2163
ATGAAGACCATCCTTTTCATTTGCACCGGCAATATTTGTCGGAGCCCGATGGCCGAAGGCATTTTTCGCCACCTCGTCCGTGGTCGTGGCCAGTACAAGGTGTTGTCGGCCGGGTTGGGGGCGATGAATGGCCAGCCACCCAGCACGCACGCGGTGCAGGCTGCCAAAGAACTGGGAATCGACATTTCCGGTCAGCGCAGCCGTATGCTGACGCCGGAGTTGGTCGACGAGGCCGACTTCGTCTTCGGCATGACGCACAATCATGTCGACACCGTCATGATGCTTTACCCGCATGCCGCCGAGAAAACCTTCCTGCTGCGCGAATTCGATGAGACCCTCGACATGTTCGAAAAGGACATCAGCGATCCCATCGGCGGTTCCTACCATGTCTATTTGAACTGCCGGGACCAGATCGAGCAGGGAATCGCCTCCCTGTTCCGCTTTCTGGAGCAGGGCCAAACCCCGGGTGGCGCGCCAGGCAGGATGGTAAAGGTCGCCCTCGGCGCCGATCACGGCGGTTTCGAGCTCAAGGAAGCCGTTAAACAACACCTCGAAAAACGCGGCGTCAGCTTCGTGGACCTCGGCACTAACTCCAAAGAATCAACGGATTACACCGATTATGCCCAGGCGGTCGGGCACCAGGTGGCGGATAAGAAAGCCGAGGCAGGCATTCTTGTCTGCACGACCGGCGTGGGCATGTCTATGGCCGCCAATAAGATACCTGGCATCCGTGCCGCCCTGGTGGGGGATGAACCCACCGCCGTGCTTTCGCGTCAGCACAACGACGCGAATGTGCTTTGTCTGGCCGGCAAGACCACCGCTCCCGAGGCCGCACGCAGAATTGTGGACGCCTTCATGACCTCGCAATTCGAGGGCGGCCGGCATGAGCGACGAATTAATAAAATGGAACCCAAGAATACCCCGATTGACCTGAGACTCCGCTCCGTTGACCCTGCCATCGCCGAGGTTGTCGAGCACGAACGCCTGCGCCAACAGGAGAATATCGAGCTGATTGCCAGCGAAAATTTCACCAGCCCGGCAGTGATGGAAGCCCAGGGCTCCGTGCTCACCAATAAGTACGCCGAGGGCTATCCCAAGAAACGTTGGTATGGCGGCTGTGAAAATGTGGATCAGGTCGAACAACTTGCCATCGATCGCGCGAAGCGGCTTTTCGGAGCCGACCACGCCAACGTTCAGCCCCACTCCGGCAGCGGCGCCAATATGGCCGTGTATTTCGCCTTCCTGAAGCCTGGTGACAAGATGCTCACCATGGATCTCAGCCACGGGGGCCATTTGACCCATGGCAACAAGGCGAATTTCTCCGGCAAGTTTTTTGAGATCGTCCATTATGGGGTGCGCAAAGAAGACGAGCGTATTGATTATGACCAGCTCGCCCGGATGGCCCGCGAGCACAAGCCGAAGATGATCACCGTCGGGGCCAGCGCTTACCCGCGGATCATCAACTTCGAGCGCATGGGAGAAATTGCCCGGGAAGTCGGGGCTTATCTCCTGGCGGATATCGCGCACATTGCGGGTCTCGTCGCCACCGGTTTGCACCCCAGCCCGGTGCCTCACGCCGATTTCGTCACCACCACCACGCACAAAACGTTGCGCGGCCCGCGCGGCGGCCTCGTCCTCTGCAAAGAAAAATACGCGAAGGAAATTGATTCCCAGGCGTTCCCCGGCATCCAGGGCGGTCCGCTGATGCACGTGATCGCCGGCAAAGCCGTCTGTTTCCAGGAAGCCCTCCAGCCCGCCTTCCGCACCTACCAGGAGCAGATCGTGCGCAACGCCAAAGCCCTGGCTGAGGCCATGAAACGGAACGACTACCGCCTGGTCAGCGGCGGAACGGATAATCACCTGATGCTCGTGGATGTGGGCGTCAGGGGATTGACCGGCAAGGAATGCCAAATCGCCCTCGACGAGGCCGGCATCACGGTCAACAAAAACACCATCCCCTTTGAAACCCGGTCGCCTTTCCAGGCCAGTGGAATTCGTCTCGGGACGCCGGCGGTGACCACCCGCGGCATGAAAGAAGCCGAAATGGCCGCCATCGGCGACATGATCAGCGAGGTCCTGCTCGATCTGAAGAACACCGAAGCCCTGGCGAAAGTCCGCCAGCGCGTGCGCGAATTGACGGCGAAATTCCCGCTCCCTTATTGA
PROTEIN sequence
Length: 721
MKTILFICTGNICRSPMAEGIFRHLVRGRGQYKVLSAGLGAMNGQPPSTHAVQAAKELGIDISGQRSRMLTPELVDEADFVFGMTHNHVDTVMMLYPHAAEKTFLLREFDETLDMFEKDISDPIGGSYHVYLNCRDQIEQGIASLFRFLEQGQTPGGAPGRMVKVALGADHGGFELKEAVKQHLEKRGVSFVDLGTNSKESTDYTDYAQAVGHQVADKKAEAGILVCTTGVGMSMAANKIPGIRAALVGDEPTAVLSRQHNDANVLCLAGKTTAPEAARRIVDAFMTSQFEGGRHERRINKMEPKNTPIDLRLRSVDPAIAEVVEHERLRQQENIELIASENFTSPAVMEAQGSVLTNKYAEGYPKKRWYGGCENVDQVEQLAIDRAKRLFGADHANVQPHSGSGANMAVYFAFLKPGDKMLTMDLSHGGHLTHGNKANFSGKFFEIVHYGVRKEDERIDYDQLARMAREHKPKMITVGASAYPRIINFERMGEIAREVGAYLLADIAHIAGLVATGLHPSPVPHADFVTTTTHKTLRGPRGGLVLCKEKYAKEIDSQAFPGIQGGPLMHVIAGKAVCFQEALQPAFRTYQEQIVRNAKALAEAMKRNDYRLVSGGTDNHLMLVDVGVRGLTGKECQIALDEAGITVNKNTIPFETRSPFQASGIRLGTPAVTTRGMKEAEMAAIGDMISEVLLDLKNTEALAKVRQRVRELTAKFPLPY*