ggKbase home page

PLM4_5_b1_sep16_scaffold_4597_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(6545..7171)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 Tax=Pedosphaera parvula Ellin514 RepID=B9XFN0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 208.0
  • Bit_score: 295
  • Evalue 2.30e-77
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 208.0
  • Bit_score: 295
  • Evalue 3.30e-77
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 204.0
  • Bit_score: 190
  • Evalue 3.90e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAGCTGACTATTAAAGACACCAAAGGGAAGAACCAGGGCGAACTGGAAGTTAAGTTCGCCATCATCGAAAACGGCAAAGGCACCCAGGCCGTGCACGATTCCGTGGTGGCGTACATGGCGGCCCAGCGAATGGGCACCGCGTGCACCAAGACCATGGGCGATGTCAATGGCTCCGGCAAGAAGCCGTGGCGCCAAAAGGGCACCGGTCGCGCACGCGCCGGCTCCTTCGCTTCGCCCCTGTGGCGCGGCGGCGGCGTGGTCTTCGGACCAAAGCCCCGCGATTTCGCCAAGAAGACCAATCGCAAAACCAAGCAACTTGCGCTGCGCAAGGCTCTCTCGGAGCGCCTGCACGCGGGCGATGTGCTCGTGGTGGATGACCTGAAGCTGCCCACGGGCAAGACCAAGGATTTCATCAGCGTGCTTTCGGCGCTGGAAGTGACCGGCACCGCGCTGATTGTGGCCAAAGAAGGTGACAAGAACCTGCTGCTGGCCTCGCGCAACATCGCCAGTGTGGCCGTAACCACCAGCGAGACGCTGAACACCTACGATGTGCTGCGTCCGGACAAGCTCGTGTTCACCCGCGGCGCCTTTGAACAAATCGAAGCCCGCCTGACCAAGGAATAA
PROTEIN sequence
Length: 209
MKLTIKDTKGKNQGELEVKFAIIENGKGTQAVHDSVVAYMAAQRMGTACTKTMGDVNGSGKKPWRQKGTGRARAGSFASPLWRGGGVVFGPKPRDFAKKTNRKTKQLALRKALSERLHAGDVLVVDDLKLPTGKTKDFISVLSALEVTGTALIVAKEGDKNLLLASRNIASVAVTTSETLNTYDVLRPDKLVFTRGAFEQIEARLTKE*