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PLM4_5_b1_sep16_scaffold_6216_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 953..1984

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 333.0
  • Bit_score: 594
  • Evalue 9.60e-167
DNA-directed RNA polymerase subunit alpha Tax=Pedosphaera parvula Ellin514 RepID=B9XFK6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 333.0
  • Bit_score: 594
  • Evalue 6.80e-167
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 332.0
  • Bit_score: 465
  • Evalue 1.00e-128

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCCAGTACGTCTTGGACGTTTTGAAATGCCGAAGCGCTTGGTCAAGGATGACCCGTCGGCCACGGAAACCTACGCAAAGTTCATCGCCGAGCCCTTTGAAACGGGCTATGGCCACACCATCGGCAACTCGGTTCGCCGCGTGCTGCTGTCCTCTCTCGAGGGCGCGGCCATCTCCTCGATCAAGGTCGACGGGGCTATGCACGAGTTCGCCACCATTGACGGCATCGTGGAGGACGTCACGGATATCGTGCTGAACCTCAAGAAGGTTCTCTTTCGCTCACACAACCGCGAGCCCCAGACCATCCTCCTCTCCGCGAACAAGGAAGGCGAAGTCACCGCCGCGGACATCCAGCTCAATCAGAACCTGGAGATCGTCAATCCCACGCAGCACATCTGCACGCTGGACAAGAAGAAAAAATTTGAAATGGAGCTCGAGGTCAAGGTCGGCCGCGGGTTCCTCCCGGGCGACGAAAACAAAAAGCCCAACCAGGCGATCGGCGTCATCGCCATCGACTCGCTGTTCTCACCGGTCACGCGCGTTCGTTACGCCGTGGAAAGCGCCCGCGTCGGCCAGCGCACGGATTACGACCGCCTGATCCTTGAGGTTTGGACCGATGGCCGCATTTCGCCTGACGACGCCCTGACGCAGGCTTCCGCGATTCTCCAGCATCACCTCGACGTTTTCGTGGGCTACGACAAGAACGCCGTGGAGTTTGAGGAAGTGGTCGACAAGCAGGACGAGGAAAAGACCAAGCTCAAGAAGCTCCTCAACATGAGCGTCAACGAGATCGAGCTGAGCGTCCGTGCGGCCAACTGCCTCAACAACGCGAACATCACCACGGTCGGCCAGCTCGCCATGAAGAGCGAGCAGGAGATGCTCAAATACCGCAATTTCGGAAAGAAATCTTTGAACGAAATCAAAGAAAAGCTCACCGCACTCGGACTCGCCCTCGGCATGAACTTCGAGGCCGACCTCCTGGATACTCCCAAGGAGGACACGAGCGGCGGCGCCATCACACTCACACGTTAA
PROTEIN sequence
Length: 344
MPVRLGRFEMPKRLVKDDPSATETYAKFIAEPFETGYGHTIGNSVRRVLLSSLEGAAISSIKVDGAMHEFATIDGIVEDVTDIVLNLKKVLFRSHNREPQTILLSANKEGEVTAADIQLNQNLEIVNPTQHICTLDKKKKFEMELEVKVGRGFLPGDENKKPNQAIGVIAIDSLFSPVTRVRYAVESARVGQRTDYDRLILEVWTDGRISPDDALTQASAILQHHLDVFVGYDKNAVEFEEVVDKQDEEKTKLKKLLNMSVNEIELSVRAANCLNNANITTVGQLAMKSEQEMLKYRNFGKKSLNEIKEKLTALGLALGMNFEADLLDTPKEDTSGGAITLTR*