ggKbase home page

PLM4_5_b1_sep16_scaffold_6317_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 2225..3574

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial Tax=Clostridium beijerinckii RepID=UPI000368D278 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 421.0
  • Bit_score: 263
  • Evalue 2.80e-67
Collagen triple helix repeat protein similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 420.0
  • Bit_score: 282
  • Evalue 1.60e-73
Collagen triple helix repeat-containing protein {ECO:0000313|EMBL:EHI98538.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 438.0
  • Bit_score: 278
  • Evalue 1.50e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1350
TTGGCCCAGCTTAGGCTTCGACCCAGGCACGACACCGCAGCCAACTGGGCTTCGGTCAACCCCTTGCTGCGGATTGGGGAGTTCGCTGAGGAGACCGACACCGGCCAGTGTAAGGTGGGCGATGGCGTCAACCTGTACAACGACCTGCCCTACGTGGGCGGGGTGGGCGGTGGGGGCGGCCATACCATCGAGGACGAGGGCACACCTCTCACCCAGCGCACGAACCTGGACTTCCAGGGCGCGGCCGTCACCGTCACCGACGGTGGGGCGGGTCCCGACTCAACTATCGTTACCGTCACCGGAGGCGAGGGGTCTACCGGCCCAACTGGCCCAACCGGTGTAACAGGGGTAACTGGTGTAACGGGCGACCCCGGCGCTACCGGAGACGTGGGCGCCACGGGGGACATAGGACCCACGGGCGTTACAGGGGTCACGGGCGTAACGGGGGACCCTGGAGCGACCGGCGACCAAGGCCAGGAGGGCGTGACCGGCGCCACCGGGCCTGACGGAGTGACAGGCGTCACTGGCGTCACCGGCGTGACGGGAGTCACAGGAGCCGACGGACTCCCCGCAGGGCTCCAGTACAAGTACAGCACGGATACCGCAAACTCGGACCCTGGCGCCGCGTTCTTCAAGTTCGACACCACCACCTTCTCAGCCATCACGACCTTCCGTATCTCCGCGAACGACAACTACGCGAACGCGCTGTCCGGCCTGCTTAGCACTTGGGCCCAGTCCTCCTCCCCCATCAAAGAGACTCTCCTCATCATCAAGGAGTCGGACCCCACGGTCCTCCTGTCCTTCGACATCCTGGGGAACATGGTAGACCACGGGGCCTGGAACTCGTACGACGCCGCGTTCGTCGAGGAGGGCACCAACCCCTTCACGAACGGCGACGTGTGCCGCATCACCTACTCACGGACGGGTGAGGTAGGGGTCACAGGAGACACGGGCCCCACCGGGGTCACCGGGGATGCTGGGACTACGGGCGCCACAGGCGCCGCTGGAGTGACGGGAGTCACTGGGGTTACAGGCGCCGTAGGCGCCACAGGCCCTACCGGGGTCCAGGGTGTAACCGGCGTGACAGGGGTGACAGGAGTCACCGGAGCCGGTGTCACGGGGGTCACGGGAGTGACTGGCGTGACCGGCGTAACGGGTGTTACTGGTGCCGGAGTCACGGGTGTGACCGGCGTTACCGGGGTCACCGGAGTTACTGGCGTGGGCGTTACCGGGGTTACCGGGGTGACTGGAACACAGGGTGTCACAGGGGTTACTGGTGTCACCGGAGTAACCGGTGTCACGGGCGCGACCGGCTCAACCAACTACCCAACCGACTTCAAGTTCGCTTAG
PROTEIN sequence
Length: 450
LAQLRLRPRHDTAANWASVNPLLRIGEFAEETDTGQCKVGDGVNLYNDLPYVGGVGGGGGHTIEDEGTPLTQRTNLDFQGAAVTVTDGGAGPDSTIVTVTGGEGSTGPTGPTGVTGVTGVTGDPGATGDVGATGDIGPTGVTGVTGVTGDPGATGDQGQEGVTGATGPDGVTGVTGVTGVTGVTGADGLPAGLQYKYSTDTANSDPGAAFFKFDTTTFSAITTFRISANDNYANALSGLLSTWAQSSSPIKETLLIIKESDPTVLLSFDILGNMVDHGAWNSYDAAFVEEGTNPFTNGDVCRITYSRTGEVGVTGDTGPTGVTGDAGTTGATGAAGVTGVTGVTGAVGATGPTGVQGVTGVTGVTGVTGAGVTGVTGVTGVTGVTGVTGAGVTGVTGVTGVTGVTGVGVTGVTGVTGTQGVTGVTGVTGVTGVTGATGSTNYPTDFKFA*