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PLM4_5_b1_sep16_scaffold_6731_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(7254..7811)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ7_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 187
  • Evalue 1.00e-44
Marine sediment metagenome DNA, contig: S06H3_L01139 {ECO:0000313|EMBL:GAI17581.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 162.0
  • Bit_score: 192
  • Evalue 3.50e-46
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 187
  • Evalue 2.90e-45

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 558
ATGGAAGCACAACGTTCAGTTGGTGTGCAGGGGTCCCCAACCCCGTCTGGCCAAACCAGCGGGCTTCTACCGACGGTTTACGAAGAGTTACGCCACCTGGCCGGTTACATGATGGCCCGCCGGGCGCCCGGCCAGACTCTGCAGGCGACGGCACTGGTGCACGAGGCGTTTCTGCGCCTCTCTCGGGCAGGGAATCGCCAATGGGACACGCCCGGGCACTTTTATTCTGCCGCCGCGGAAGCAATGCGCCGCATTTTGATCGAAGAGGCGCGCCGGAAAGGCAGTCTGCGGCGTGGAGGTGGGCAGCAGCGGTTGAGCCTGGATGAGGTGCAGTTGGCGATGGAGACTCCCCCCGACCATTTGCTCGCGCTTGATGAGGCCCTAAAGAAATTTGAGGCGGAGGACCCGGTCAACGCCGAGTTGGTTAAGTTGCGTTTTTTTGCCGGCCTGACCGAGGTCGAAGCGGGCAAAGTGCTGGGAATGTCCGAGCGGACCGTGAAGCGGCATTGGGCGTTTGCGCGAGCCTGGTTGTACCAGGAACTCGCCGAACCGGATTGA
PROTEIN sequence
Length: 186
MEAQRSVGVQGSPTPSGQTSGLLPTVYEELRHLAGYMMARRAPGQTLQATALVHEAFLRLSRAGNRQWDTPGHFYSAAAEAMRRILIEEARRKGSLRRGGGQQRLSLDEVQLAMETPPDHLLALDEALKKFEAEDPVNAELVKLRFFAGLTEVEAGKVLGMSERTVKRHWAFARAWLYQELAEPD*