ggKbase home page

PLM4_5_b1_sep16_scaffold_7114_6

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(6096..6422)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-2 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 63.0
  • Bit_score: 59
  • Evalue 1.50e-06
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 63.0
  • Bit_score: 59
  • Evalue 2.00e-06
translation initiation factor IF-2 similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 79.0
  • Bit_score: 58
  • Evalue 9.20e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 327
ATGAGCGATTTTGTGAATTATACGAAACGGAGCGTGGAATTGCCTCCAGGCTGCAAGGACCTTATTGATGTTCTCAGACTTCCAGCGCCCAGCAATTTAGCGACTTCGCAATTGCTGTGGCAGCAACCCACAGCCGTGAAGATAGTTCTCATTTCCGAGCCAATCCTGGTTGGACAACTTGCTCCATTACTCGGCCAGAAGCCGATCACGATCATCGCGGATCTGATGGAGCTAGGGGTTTTTGCGAACCTGAAACAGGAGTTAAACTTCGAGATTGCCTGCAAAGTCGCGCAGAAGTATGGGGTTAGACTGGAGAGACTAGAGTGA
PROTEIN sequence
Length: 109
MSDFVNYTKRSVELPPGCKDLIDVLRLPAPSNLATSQLLWQQPTAVKIVLISEPILVGQLAPLLGQKPITIIADLMELGVFANLKQELNFEIACKVAQKYGVRLERLE*