ggKbase home page

PLM4_5_b1_sep16_scaffold_11286_4

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 4883..7381

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin-type calcium-binding region:RTX N-terminal domain Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XT8_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 576.0
  • Bit_score: 211
  • Evalue 1.80e-51
hemolysin-type calcium-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 576.0
  • Bit_score: 211
  • Evalue 5.00e-52
Hemolysin-type calcium-binding region:RTX N-terminal domain {ECO:0000313|EMBL:CAD84072.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 576.0
  • Bit_score: 211
  • Evalue 2.50e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2499
ATGGACACCAAGACGCTGAGCAACGGTGCGCACGCGCTGGTGGCCAGAGCGATTGATCCAAGCGGCAACATCGGTGTCAGCGCCACGGTCAACGTGACGGTGAGCAACGTGACGCCACCGCCACCGGATACCACGCCACCCAGCGTTACGATCACGCTGCCACTCCCCAATGCTTACCTCGCTGGTACATACACGGTGTCAGTGACCGCTACTGATAACGTGGGCGTAGTCTCGTCCACCCTGTACGTGGACGGCGTGTCTCAAGGCGTGGACCCAACGCAACCGTACAGCTTCTCGCTAAACACGCTTCTGTTCACCGATGGATTACACACGCTGGTTGTGACGGCCATCGACGCGGCGGGTAACACGGGCACTTCAACCAGCGTGCCTATCACCGTGGATAACACAACACCGGTCCTGAGCAGCGCGTCAATCAACGGAGCAAGCCTTCAACTGAACTACAACGAAACACTGAACACAGCCAGCGTGCCGCTCACTACCGCGTTTTCCGTGAAGACCGACGGGAACAGCCGAACGCTGAACAGCGTCTCGATCTCTGGGTTGCAAGTGCTCATCACGCTGTCGGTGGCCGTACTGGCCGCCAACGTGGTGACAGTCAGCTATACCGCGCCCACTGGGACCGGAGCCAAGCCAGTGCAAGACCAAGCGGGTAACAATGCGGCGAACTTAACCAATCAGGCGGTAACCAATGCGACTCCAGGAGATACCACCGCGCCTGTCATCACCTCGATGACTGTCAATGCCGCAGCGCTGGTCATCCAGTACAGCGAGACGCTGGACTCTAGTTCGGTGCCAGCCACGGCGGCATTTGCAATTATGGTCAATGGTTCGGCGCGCGGTGTTAACACCGTTGCCATCAGCGGGTCCAGCGTGACGCTAACGCTGGCCTCCGCGGTTATCTCCACCGACACGGTGATTGCCTCGTACTCGCAGCCGCTCACCAATAAGATTCGCGATTTGGGCCAGGTTAATGCCGCCTCGTTCTTCAACTTGCCGGTGGCTAACATCACCGCTGTACCAGCCACCGATATTGCCTCGTTCGTGTCGCAATCCATTCCTGCGGTAACTATGGTTACCGGTGGCAACCAGACCGTCGGCGTTACCATGCGCAACGATGGCACGGCGACATGGACGGCTCCCGCTGGGTATCACCTCTACTCACAGAACCCGGCGGGCAATACCAACTGGGGGTTGAGCCAAGTGGCCGTGCCCGGCAGCGTGCCGCCCAATGGTAACGCGGCGTTCAGCTTTGGGATTACAGCACCATCCACCGCTGGAACCTATAACTTCCAGTGGCGCATGCGGCATACAGCCACGGAGTTTGGGTCACAAAGCGTGAACACTTCCATTACCGTGTCCTCGCCAACGCCTGGCGGGATTTTCGTATCGACCACGGGTGACGACGCGAATGGCAATGGCTCGCAGAGCAATCCTTACCGTACGCTGAACAAGGCGCTCGGCCTGGTTCAACCGAGTGGCAGCGTACAGATCAGGGGTGGCACGTACATCGAGGGCATCCAGAACAACTGTCCCGGTGGAACGTCGTGGGTCAACTCGATTACGGTCACCGCATTCAACAATGAACCTGTGACGCTGAAGCCATCATCTGGCTTTGTTATCTGGCTGCAAGGCGCGGTCAAGAAGTACATCATCATCAATGGCTTGGTACTCGACGCCATCAACGCTCAGTACAATACAATCAAGCTGGACCGTCCGTCGGCTGGTACCGATACGGCTAATCATATTCGTGTATCCAACTGTGAACTCAAGAACAATTTGACAGCTCAAGCGCTTCTTACCACCTATGCTTCCGACTTCAACGAGTTCCAGAACCTGACCATCCACAACAACGGCAAGGTTGCTGATAGCGATGGGTTATACGGCTATGCGATGTATATCAAGGGCAGCAGCAACATCATCGAGCGGTGTACGCTATATGACCAGGGATCATCCGGAATCCAGATTTTCTCGACCACTGGAGCCAGCGAGCCGCCGAACTCAAATATCATTCGCAACAATATCATCCGCAATAACTGCGTGCTGAGCGCCGCGCAAGGCCGAGGCGCTGGAATCACGGTGGCCAGTGGTTCGCAGAATTTAGTGTACAACAACTTGGTCTACTCGAACTTCAGGGGTATCAGCTGCTCAAACACGTTCACCAATAAGATCCTGTACAACTCGGTGTACAGCAATCCAGATATCGGCATCTACCTGGAGAATGGCGGAAGCCACGTTTGCCGCAACAACATTTGCTATCAGAACGGCACCAACTTTTTTAACACCTCGGGCGGCGGCACGGTGACGCCGAACGTGACCACGCAGAATCCGCTATTCGTCAACGCTACCGCTGGCAACTTCCACCTGCTAATCGGATCTCCAGCGATCAACACGGGTGCTCCGGTGCCGGAAGTGACTACCGATTATGACAGCGTAACACGCGGTAACCCATCGGATCAGGGTGCGTACGAGTTCGTGTGA
PROTEIN sequence
Length: 833
MDTKTLSNGAHALVARAIDPSGNIGVSATVNVTVSNVTPPPPDTTPPSVTITLPLPNAYLAGTYTVSVTATDNVGVVSSTLYVDGVSQGVDPTQPYSFSLNTLLFTDGLHTLVVTAIDAAGNTGTSTSVPITVDNTTPVLSSASINGASLQLNYNETLNTASVPLTTAFSVKTDGNSRTLNSVSISGLQVLITLSVAVLAANVVTVSYTAPTGTGAKPVQDQAGNNAANLTNQAVTNATPGDTTAPVITSMTVNAAALVIQYSETLDSSSVPATAAFAIMVNGSARGVNTVAISGSSVTLTLASAVISTDTVIASYSQPLTNKIRDLGQVNAASFFNLPVANITAVPATDIASFVSQSIPAVTMVTGGNQTVGVTMRNDGTATWTAPAGYHLYSQNPAGNTNWGLSQVAVPGSVPPNGNAAFSFGITAPSTAGTYNFQWRMRHTATEFGSQSVNTSITVSSPTPGGIFVSTTGDDANGNGSQSNPYRTLNKALGLVQPSGSVQIRGGTYIEGIQNNCPGGTSWVNSITVTAFNNEPVTLKPSSGFVIWLQGAVKKYIIINGLVLDAINAQYNTIKLDRPSAGTDTANHIRVSNCELKNNLTAQALLTTYASDFNEFQNLTIHNNGKVADSDGLYGYAMYIKGSSNIIERCTLYDQGSSGIQIFSTTGASEPPNSNIIRNNIIRNNCVLSAAQGRGAGITVASGSQNLVYNNLVYSNFRGISCSNTFTNKILYNSVYSNPDIGIYLENGGSHVCRNNICYQNGTNFFNTSGGGTVTPNVTTQNPLFVNATAGNFHLLIGSPAINTGAPVPEVTTDYDSVTRGNPSDQGAYEFV*