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PLM4_5_b1_sep16_scaffold_12813_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(175..837)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 220.0
  • Bit_score: 334
  • Evalue 8.80e-89
4-hydroxy-tetrahydrodipicolinate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XSF8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 220.0
  • Bit_score: 334
  • Evalue 6.20e-89
dapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 215.0
  • Bit_score: 264
  • Evalue 2.20e-68

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 663
GTGCTGGCGGGCACCGGCGGCAATTCCACGAGCGAGGCGATTTACCTGACCAAGGCCGCGGAGGAGCAAGGCGCGGACGGCTCGTTGCAGGTCGCGCCCTATTACAACAAGCCAACGCAGGAAGGTTTGTTCCAGCACTTCAGCGCCATCGCCGTGGCGACGAAGCTCCCTCTGGTGCTCTACAGCATTCCGGGGCGTTGCGGCATTGAGATCGGCATCGACACAGTGAGGCGGCTGGCGACGGCGCACAAAAACATCGTCGGCATCAAGGAGGCGGGCGGCAATGCGGACCGCGTGAGCCAGCTCCGGGCCGCGCTGGGGACGAAGTTCGAGATCATGAGCGGCGATGATTCACTTACGTTGCCCTTCATGAGCGTGGGCGCCAATGGCGTCATCAGCGTCGCGTCGAATATCATCCCTCGCGAAGTCAGCCGCATGGTCAACGCGTTTGCGTCGGGCAAGATTTCCGAAGCACAAAAACTGCACGCGAAATTCTACCCGCTGTTCAAGGATCTGTTCATCGAGACCAACCCGGTACCGGTCAAAGCCGCGCTGGCCATGATGGATTTGGTGCGGGAGGAATACCGCCTGCCGCTGGTGCCGATGGGCGCGTCGAACAAGGCTGTGTTGAAGGCGACGCTGAAGGCGGTTGGGGTTTTGTAG
PROTEIN sequence
Length: 221
VLAGTGGNSTSEAIYLTKAAEEQGADGSLQVAPYYNKPTQEGLFQHFSAIAVATKLPLVLYSIPGRCGIEIGIDTVRRLATAHKNIVGIKEAGGNADRVSQLRAALGTKFEIMSGDDSLTLPFMSVGANGVISVASNIIPREVSRMVNAFASGKISEAQKLHAKFYPLFKDLFIETNPVPVKAALAMMDLVREEYRLPLVPMGASNKAVLKATLKAVGVL*