ggKbase home page

PLM4_5_b1_sep16_scaffold_12712_4

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: 1743..2759

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, type 11 domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XP79_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 332.0
  • Bit_score: 275
  • Evalue 5.30e-71
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:EEF58330.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 332.0
  • Bit_score: 275
  • Evalue 7.40e-71
helix-turn-helix, type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 324.0
  • Bit_score: 253
  • Evalue 6.10e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAAAAATCAGAATATGAAAAAGAGTAAGCGGTTGGGCGCAAGCCGGGCGGCGGCCGAACGGATGGATCGGATTCACCAGCTCATCAAAGCGAAGAAGTTCCCGAATTGTCCCAGGGTGGCCAGGGAGTTCGAGGTGGCGAAGCGAACGATCAAGCGGGACATCGAGTTCATGAAGGATCGATTCCAGCTGCCCATCGGATTTGATACGGGGAAGAACGGCTATTATTACACTCAGCCGGTGGACCACTTTCCCGAGCTGCCACTGAGCGAGGCGGACGCGTTCGCGTTGTTCGTCGCGAGCAAGGCGATCGAGCAGTATCGGGGAAAGCCTTTTCAGCGGCTGCTGGAGACGGCGTTTCGGCGGTTGACCGGGCGGCTGGATGAGGGCGTGAAGTATTCGATGGGCAGCCTGGACGGGGTGGTGTCGTTTCATCCGTTCGCACCGGGAGATGCGGATTTGGAAACGTTCGAGCTGCTGACAGGGGCTATCAGGGAGCGCCAGGCGGTGAAGTTCCTGTATCGGAACCGAGGGCAGCTCAATGCGCAGAAGCGGCATGTGCATCCGTTGCACGTGGCTTACGTGGACAATCATTGGTGCATGTTCGGGTTCGATGTGGTCCGGAAGGACACCCGGACGTTCGTACTGAGCCGGCTCAGCACTCCGACGCTGACGGGCGAGAAGTTCCCGGTGACAAAGAAATTCGACCTGGAGGAGTACTTACGCGGGAGCCTGGGGGTGTACAAAGGGCAGGATGATCATGAGGTGGTGGTGGAGTTCGATATCGCGGGGGCGGATGACATCCGGGGTCGGGATTGGCATTCGAGCCAGAAATTGGAGCCGCTGCCGGAAGGTCGGCTGCGGGTGACATTGAGGTTGAATAGCCTTGAGGAGGCAGAGAAGTGGGTGCTGGGGTTTGGGACGCACGCCTCGGTGGTGGGACCGAAGGAATTGCGGGAGAGGCTGGCCGCGACGGGTGGGGAGATTGCCAGGCGCTATGCGCCGGTTGAGGGTTGA
PROTEIN sequence
Length: 339
MKNQNMKKSKRLGASRAAAERMDRIHQLIKAKKFPNCPRVAREFEVAKRTIKRDIEFMKDRFQLPIGFDTGKNGYYYTQPVDHFPELPLSEADAFALFVASKAIEQYRGKPFQRLLETAFRRLTGRLDEGVKYSMGSLDGVVSFHPFAPGDADLETFELLTGAIRERQAVKFLYRNRGQLNAQKRHVHPLHVAYVDNHWCMFGFDVVRKDTRTFVLSRLSTPTLTGEKFPVTKKFDLEEYLRGSLGVYKGQDDHEVVVEFDIAGADDIRGRDWHSSQKLEPLPEGRLRVTLRLNSLEEAEKWVLGFGTHASVVGPKELRERLAATGGEIARRYAPVEG*