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PLM4_5_b1_sep16_scaffold_13793_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(571..2433)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFI5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 614.0
  • Bit_score: 649
  • Evalue 1.90e-183
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF61349.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 614.0
  • Bit_score: 649
  • Evalue 2.70e-183
type I phosphodiesterase/nucleotide pyrophosphatase similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 625.0
  • Bit_score: 278
  • Evalue 3.20e-72

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1863
ATGAGTGTTCCTTCCCTTGCCTCCCGCCGGTTGCTCCTGGTCGGAGTGGATGCCGCCGACTGGAATCTGCTTCATCCCCTGGTGGACGCCGGGCAGCTGCCTGTATTGAACCGAATGGTTGAAGCCGGCGCATCGGGACGGCTGCTTTGCGCCGCGCCGCCGGTTGCCGCTGCCCAATGGGTCAGCCTGGCTGCCGGAAAGCGGCCCTGGCAACACGGCATCTGCCAATCGAGCGAACCGGCCGATGATGGCCGAAGTTGGAGTCCCGTTACCGCCGCCTCGCCCCGTTCGCTGGCCCTGTGGGAAATGCTGGCTCGCCACGGTAAACGATGCGTCGTTGTGGGCTGGCCCGCTACCCATGGCGCAAGGAGCCCTGGTATCACTGTCGTCTCCGATGCCTATCCCGTGCCAACCGCCGCGCCAGGCATCAGCCCGTGGCCGCCGCCACCGCCGGGCACGTATTGGCCTGAGGATCTTGGTGCCGGACTGGATCGTTTGCGGGTGAGCCCGGAGCAGATTCAGGCGGACGTGATCTCACTTTACCTGCCGCAATGGCAGAAGATCGACCAAAGGCGGGATCATCGGTTGGGTCAATTGCGGGCGCTCCTGGCTGCCGATTACTCTTATCTCGCAGCGATTACGGAGTTGCTCCGCCGGCAACCGTGGGACTTTGCCGCGGTGCGCTTCCCGGCCTTGGGGAATATCGCCCGCAGTTTCCTGCCCTACCATCCACCTCGTCGCCCATCGGTAAGCGACCAGGATGCTTCTCTTTACGGAGAAGTGATGAGGAGCGAATGCCGCATGCTCGATTTGATCCTGCAACAGCTCGGCCAGTTGGTTGGTCCCGAAACAGCCATTATTCTCGTTTCCGGTCATGGACTCCGGGCCTTTGATGCTTCGCCTCAAGGTCCGCCTTCGCCTGATGCTGAAAACTGGAAATCGACCTACGGCATCTTCGTTTCCAGCGGTCCGGGCTTTGCCACTGATGCCCTGTTGCATGGGGCCACGGTGATGGACGTTGCCCCGACGGTGTTGACCTGGTTTGGACTTCCCATTGGCGACGACATGGAAGGCCGCGTTTTGATCGAGAGTTTCGTTGCTGCTCCAGAGGTGCGTCGGGTGGCGAGTTGGGATTCCCCACAGCCGAACTCCGACCGGCCGGCCGAGGCGCGCGGGCCTGACTGGAACTGGAATTTCATTCGCTCGTGTTTGGAGGCGGGGCAACTCGAAAGGGCGATGCCCCTTTTGGAACAGCTGTTTCGTGAATTCCCGGAACGTCCCGAACTGGCTGAAACCCTCTTCGAATGTCAGCTCGAGCTCAAGCAGCCAGCCGAGGCGAGCCAAACCCTGGAGGTATTGTTGGAGGGGCTACCGCCCGGACCCGCTGCCATGGTATTCCGAGCCCATTTGGCCTGGGCACAACGCGACCTCAATCAGGCGCGCTCGCTGGTTCAGGCTGCCATGCAATTCCGGCCCACCGACCGACCCACTCTGGGCCGGATGGGAATTCTGTTCTTGCGCTTACGGGAATGGGATCGGTTGGCCGACGTGGCTCGTCAGGGGATCGCTCTGGATGACCAGGACCCGGTCGCCTGGCTGGGTTTGGCAACGGCGCTCCTGCGCAAACGCCAGCCGGCGGAAGCGGCGGAGGCGGCGATGCGGGCGATCGGTTTGAAGTATTTTCTGCCGGACGCTCACTTCATCCTGGCTCGGGCGCTGGTGGCCCAGGGCCATTGGGCGCAGGCTCGCGAGGCCTTGGAAGCAGTGCAAAAGATCCAGCCCAACAACCGGGTCGCCAACAGCTATTCCCACAGAATCCCTGACGCTGACGGGAAGCATTCCCCTCAAAGCGGCGATTCGTAA
PROTEIN sequence
Length: 621
MSVPSLASRRLLLVGVDAADWNLLHPLVDAGQLPVLNRMVEAGASGRLLCAAPPVAAAQWVSLAAGKRPWQHGICQSSEPADDGRSWSPVTAASPRSLALWEMLARHGKRCVVVGWPATHGARSPGITVVSDAYPVPTAAPGISPWPPPPPGTYWPEDLGAGLDRLRVSPEQIQADVISLYLPQWQKIDQRRDHRLGQLRALLAADYSYLAAITELLRRQPWDFAAVRFPALGNIARSFLPYHPPRRPSVSDQDASLYGEVMRSECRMLDLILQQLGQLVGPETAIILVSGHGLRAFDASPQGPPSPDAENWKSTYGIFVSSGPGFATDALLHGATVMDVAPTVLTWFGLPIGDDMEGRVLIESFVAAPEVRRVASWDSPQPNSDRPAEARGPDWNWNFIRSCLEAGQLERAMPLLEQLFREFPERPELAETLFECQLELKQPAEASQTLEVLLEGLPPGPAAMVFRAHLAWAQRDLNQARSLVQAAMQFRPTDRPTLGRMGILFLRLREWDRLADVARQGIALDDQDPVAWLGLATALLRKRQPAEAAEAAMRAIGLKYFLPDAHFILARALVAQGHWAQAREALEAVQKIQPNNRVANSYSHRIPDADGKHSPQSGDS*