ggKbase home page

PLM4_5_b1_sep16_scaffold_16382_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(3219..4142)

Top 3 Functional Annotations

Value Algorithm Source
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJU4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 314.0
  • Bit_score: 505
  • Evalue 3.70e-140
Radical SAM domain protein {ECO:0000313|EMBL:EEF59970.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 314.0
  • Bit_score: 505
  • Evalue 5.20e-140
radical SAM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 313.0
  • Bit_score: 466
  • Evalue 5.40e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 924
ATGAACCGCTTCGCCCAAAAGCTCGCCGAGCACGGCCTGACCTTGCGCCGGGGCCGGCTGATGACGTTGCAAATCAACGTCGGACGCCAGTGCAATCAAGCCTGCCGCCACTGCCATGTCGATGCCGCGCCGTGGCGCACGGAGATGCTCGACGAAACCACGGCACGCCGCATCGGCGACTGGATGGCCACACACCGCCCGGAGATTGTGGACCTCACCGGCGGCGCGCCGGAACTCAGCGAGTTCTTCCGCTACCTCGTCGAGCAGGCCCGGGCCTGCGGCGCGCACGTCATCGACCGCAACAATCTCACGATCATCGAGGAGTCGGGCTTCGACTGGCTGCCCGAATATCTCGCGCGGCACAGCGTGGAGGTGATCGCCTCCCTGCCCTGTTACTCGGCGAAGAACGTCAACCAGCAGCGCGGCAACGGCGTGTTCGACAAAAGCATCGCGGCGTTGAAAACGAAACTTCCGTTGCACCTGGTTTACAACCCGCTCGGTGCAAACCTGCCCGGGCCGCAAGCCGAGTTGGAAACCGACTACAAGGAAGCGCTCCAGTGCGACTTCGGCATCGTCTTCAACCGGCTCTTCACCATCACCAACCAACCCATCGCACGTTTCGCCGAGGATCTGCGTGCGCACGGCCGCTGGGATGAATACCTCGATCTGCTGGCCGACGCCTTCAATCCCTCCACGGTCGAAGGGCTGATGTGCCGCACGACACTAAGCGTGGGTTATCGCGGCGAGGTCTATGACTGCGACTTCAATCAGATGCTCGGCATGCAGTTGCGCAACGGCGCGCCACTACATCTCTGGGATGTGACGCCGGAATATCTCGCCGGTCGTGCCATCGCCACCGGGGAACATTGTCTGGCCTGCACCGCGGGCGCGGGCAGCAGTTGCACCGGTGCGCTGGCGGGATGA
PROTEIN sequence
Length: 308
MNRFAQKLAEHGLTLRRGRLMTLQINVGRQCNQACRHCHVDAAPWRTEMLDETTARRIGDWMATHRPEIVDLTGGAPELSEFFRYLVEQARACGAHVIDRNNLTIIEESGFDWLPEYLARHSVEVIASLPCYSAKNVNQQRGNGVFDKSIAALKTKLPLHLVYNPLGANLPGPQAELETDYKEALQCDFGIVFNRLFTITNQPIARFAEDLRAHGRWDEYLDLLADAFNPSTVEGLMCRTTLSVGYRGEVYDCDFNQMLGMQLRNGAPLHLWDVTPEYLAGRAIATGEHCLACTAGAGSSCTGALAG*