ggKbase home page

PLM4_5_b1_sep16_scaffold_18361_9

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(6383..6766)

Top 3 Functional Annotations

Value Algorithm Source
Triple helix repeat-containing collagen Tax=Bacillus thuringiensis Bt407 RepID=K4MCX1_BACTU similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 133.0
  • Bit_score: 133
  • Evalue 9.30e-29
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 133.0
  • Bit_score: 133
  • Evalue 2.60e-29
Collagen triple helix repeat domain-containing protein {ECO:0000313|EMBL:CEN90783.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 140.0
  • Bit_score: 129
  • Evalue 2.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 384
CCTGTTGTAGTTGCGCTCGGGCAAACCGGGCCAACGGGGCCTTCACCAGGAGCGACTGGTCCGACGGGAGCGCAGGGTCTGGCGATTGCTGGATCAACTGGTCCGACGGGAGTGCGGGGGACTGGACCGACGGGGCCGACGGGAGCGGGCGCTTTCACTGGTCCAACTGGGTCGGCTGGTTTGACGGGTCCGCCGGGATCGGCGGGGCCGACGGGTATATCTGGACCGACTGGTCCATTAGGGATTGAAGGACCAACAGGATCGACTGGACCAACAGGATCGAGTGGACCCACAGGTCCAGGGCCTTGGGTGCAGATTACTCAGGCTGCTTATAATCCGTTGAGCCCGCCTAACCCGGCTATATTGTATGAGGTGGTGGGATGA
PROTEIN sequence
Length: 128
PVVVALGQTGPTGPSPGATGPTGAQGLAIAGSTGPTGVRGTGPTGPTGAGAFTGPTGSAGLTGPPGSAGPTGISGPTGPLGIEGPTGSTGPTGSSGPTGPGPWVQITQAAYNPLSPPNPAILYEVVG*