ggKbase home page

PLM4_5_b1_sep16_scaffold_19349_1

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..634)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE8CDA related cluster Tax=unknown RepID=UPI0003CE8CDA similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 199.0
  • Bit_score: 138
  • Evalue 4.80e-30
Integrase {ECO:0000313|EMBL:ESY92820.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 199.0
  • Bit_score: 138
  • Evalue 6.80e-30
int1; hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 199.0
  • Bit_score: 127
  • Evalue 2.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCACGGCGGAAGCGGCGAACACGAGGGGCGGGCCTCTACTTGGTTGAGAGCCCAAAGACAGGCATCTACCAGATCAGGGGTGTCGTACTCGGGCAGCCCGTCAGAGAGAGTACATTCACGACTGACCGCAGCCTTGCAGAGAAAGTGCGCCTGAAGACCGAGCAGGACTTGCACGCCCGGAAGGTGCACGGTCCCGCAGCGGTCGCGACGTTCGGCGAGGCGGTGGAAGATTACCTGGATGCGCACCCGGAGTTTGAGAAGCAAGACCTAGTGCACGTCAAGAAGCTCAATGACCACTTCGGCGACACGTTGCTGTCTGAGATCGACCAGCTCGCCGTGCAGAAGGCAGCCAAGGCGCTGTACCCCAGCTACGGGCCGGCGAGCGTCAACCGCGTAGTGTACACTCCCGTAATCGCCATCATGCGGAACGCGGCGGCGAACAAGAAATGCGGCGTGCCGATGCTCAAGCGGATGAAGGCCGTCAAGAAGCTCGTCAAGCACGCTCCCGACTCTTGGGTGACTGCCTTCCTCGCCGGCTGCCAGCACAAGAAGCTGCGGGCGCTGGTGTGGCTCATGACGACGACGGGCTGCCGGGTGAGTGAAGCGATCGGACTTATGTGGCGGAACGTC
PROTEIN sequence
Length: 211
MARRKRRTRGAGLYLVESPKTGIYQIRGVVLGQPVRESTFTTDRSLAEKVRLKTEQDLHARKVHGPAAVATFGEAVEDYLDAHPEFEKQDLVHVKKLNDHFGDTLLSEIDQLAVQKAAKALYPSYGPASVNRVVYTPVIAIMRNAAANKKCGVPMLKRMKAVKKLVKHAPDSWVTAFLAGCQHKKLRALVWLMTTTGCRVSEAIGLMWRNV