ggKbase home page

PLM4_5_b1_sep16_scaffold_30486_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(3828..4637)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 175.0
  • Bit_score: 267
  • Evalue 1.20e-68
Ribosomal RNA small subunit methyltransferase H Tax=Pedosphaera parvula Ellin514 RepID=B9XIH4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 175.0
  • Bit_score: 267
  • Evalue 8.80e-69
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 2.00e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 810
ATGGAAGGTGCCCGAGTTCATCCACAAGCCCGTGTTGGTTTCGGAAGTCCTGGCTGCAATAAGACCGCGGGACGGGAGGCGCTACGCCGACGGCACAGTCGGTGGGGGTGGACATGCGGCGACCATATTGGCCGCGAGTTCACCGACTGGGATGTTATNNNNNNNNNNNNNNNNGGATGCGATCGCGATGGCGCCGCGGTTGAAGCGGCCAGCGGCCGTTTGGCAGAATTCGCAGGCCGGTTCGAGATCCGGCGGGGCAATTTTGCGGAGATGGCGGATTGGGTGCCAGCGAACAGTTGCGATGGCGTGCTGCTGGACCTGGGCGTGAGTTCGCCGCAGTTCGACGAGGGCGCGCGCGGATTCAGCTTTCAGCAGGACGGTCCGCTTGACATGCGGATGGACGACCGGCAGGCGCTGACAGCTGCGGCGCTGGTCAACGAAGCCGGGGCGGAAGAGCTGGCGGAGATTTTTTGGCGATTCGGCGGTGAGCGCGAATCGCGGCGGTTCGCGAAAGCTATTGTGCATGACCGCGAACTCAGGCGGTTCGAAACCACTGGCCAGCTCGCCGGGCTGATCGAGCGCCTGGCGCCCAGGCACGGCCGGAAAACGCATCCGGCGACGAAGGTTTTCCAGGCGCTGCGGATCGCCGTCAATGACGAGATTGGATCTTTGGAACGCGGATTGGAAGGCGCGGTGCGCGCGACTACTCGGTGCCGGGGGACGTGGATGTGCCGGAGCTGCGGCAGCCGCGACAGCCGGAGCTGCGGTGGGTGGTGCGGAAGGCGGTGGCGCCCTCCGAGGCCGAATTGA
PROTEIN sequence
Length: 270
MEGARVHPQARVGFGSPGCNKTAGREALRRRHSRWGWTCGDHIGREFTDWDVXXXXXXGCDRDGAAVEAASGRLAEFAGRFEIRRGNFAEMADWVPANSCDGVLLDLGVSSPQFDEGARGFSFQQDGPLDMRMDDRQALTAAALVNEAGAEELAEIFWRFGGERESRRFAKAIVHDRELRRFETTGQLAGLIERLAPRHGRKTHPATKVFQALRIAVNDEIGSLERGLEGAVRATTRCRGTWMCRSCGSRDSRSCGGWCGRRWRPPRPN*