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PLM4_5_b1_sep16_scaffold_50423_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(771..1853)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 323.0
  • Bit_score: 447
  • Evalue 1.50e-122
Ribosomal protein S12 methylthiotransferase RimO Tax=Pedosphaera parvula Ellin514 RepID=B9XHC1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 323.0
  • Bit_score: 447
  • Evalue 1.10e-122
RNA modification enzyme, MiaB-family similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 267.0
  • Bit_score: 214
  • Evalue 3.30e-53

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGTAACGAGCCCAAAAAGCAGGCGGTCCGGGTGGGATTGATTTCCCTCGGGTGCGCCAAGAACCTGGTGGACGCCGAGATCATGCTCGGCAGTCTATTGAAGTCGGGGGTGGAGATCACCAATGACCCCGCCCGGGCCGACGTCATGATCGTCAATACCTGCTCCTTCATCGACTCGGCACAGGAGGAAAGCGTCGATGCCATTCTTGAGTCCGCCGAGGTCCGGGACGCTCAAAACCGCGGCCAGGCTCTTGTCGTCTCCGGTTGCCTGCCCCAGCGCTTCCGCGATGACCTCCCCAAACTCTTTCCGGAGGTCGATGCGTTCATGGGTATTGACCAGGTCGCGCAGATCGGTTCCGTTGTCCAACAAGCCCTGGAGCGACGCACCGGGAAAATCGCTCTGCCCGCGGCCCGGCCCTCGCGCCCTCGCGCCGGCAAAGTCGTCGGCCAGTTGGGGGAGCTCGAGAAGCGCCTTGGCGTCGCGCAAACCGGCGAAAGCCTCCGCCAATCCGGTAAGTTCGGCCGCACCAGGACGGTCGTGGGCAAGCCGGCTCCCGTTCCGCCGCTGGTGGATGTCAACCTGCGTCCCCAATACATACCGGATTACGCCACTCCCCGCTTTCGCCTCACCCCGCGGCACTTTGCTTATGTTAAGATCGCCGAGGGCTGCAACCACCCGTGCAGTTTCTGCATCATCCCCCGCATGCGTGGTTCGCATCGCAGCCGCACCCAATCCGATATCGTCGCCGAGGCCAAAGCCCTCCTGGCGGACGGCGTGAAGGAGTTAAACCTGATTTCGCAGGATTCCACGTATTACGGCCTGGATCTCCGGGCCGGCCACAGCCGCGCCATTTCCTCCCCGGACAAATTCAAGGCCGCGGTGAAGTCGCTCCCGGTCGAGTCGCAGACCATCTGCACTCTGCTGCGGGAATTGAACGCGCTGCCCGGCGATTTCTGGATCCGATCCAGACGATCGCTGAGTGTCCGAAGGTGGCGCGTTACGTGGATATTCCCTTGCAGCACATCCACCAGAACATGCTTGAGCGCATGCGGCGGGAAACCTCGCAGGCCTATATCGTAG
PROTEIN sequence
Length: 361
MSNEPKKQAVRVGLISLGCAKNLVDAEIMLGSLLKSGVEITNDPARADVMIVNTCSFIDSAQEESVDAILESAEVRDAQNRGQALVVSGCLPQRFRDDLPKLFPEVDAFMGIDQVAQIGSVVQQALERRTGKIALPAARPSRPRAGKVVGQLGELEKRLGVAQTGESLRQSGKFGRTRTVVGKPAPVPPLVDVNLRPQYIPDYATPRFRLTPRHFAYVKIAEGCNHPCSFCIIPRMRGSHRSRTQSDIVAEAKALLADGVKELNLISQDSTYYGLDLRAGHSRAISSPDKFKAAVKSLPVESQTICTLLRELNALPGDFWIRSRRSLSVRRWRVTWIFPCSTSTRTCLSACGGKPRRPIS*