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PLM4_5_b1_sep16_scaffold_63925_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(302..718)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSH5_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 55
  • Evalue 2.70e-05
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 55
  • Evalue 7.60e-06
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADV27189.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 74.0
  • Bit_score: 55
  • Evalue 3.80e-05

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGCGTTGGCCCGGCGATGTCTTCGATCAACAGTCGAAAGACGAACCGGAGCCACCTCTCGACTCGGTCCGTGATGCCGTCGAGCGTCTCCCCCCGGAGCTCCGTTCTGCTGTTGAAGGCGTCTTCTACGGACAGATGCCCAAAGAGGAATGCGGCCGGCTTGATGGGGTCGGGCGCACAACGATCAACGACCGGCTCCGCCGTGCCTTCGAGGCGCTCCGTGAAGACCTGCAAGGCCAGATCGCAAGGGGCGAAGTGCCGTCAGCCGAGCTGGCTAGATGGCCTGTGCTCGGCGCATTGGCACTGGAAGGACCAGGGGACGAAACCGGATCCGACCTACGAGCTGAAGGTGATGAGGAAGATGATTACCCCAACGTGGGATTGGATGACTCCAGCACAGGCTCGAGCTGTGATTGA
PROTEIN sequence
Length: 139
VRWPGDVFDQQSKDEPEPPLDSVRDAVERLPPELRSAVEGVFYGQMPKEECGRLDGVGRTTINDRLRRAFEALREDLQGQIARGEVPSAELARWPVLGALALEGPGDETGSDLRAEGDEEDDYPNVGLDDSSTGSSCD*