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PLM4_65_b1_redo_sep16_scaffold_14473

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_14473_1
unknown

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309..587
DNA (279bp) protein (93aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14473_2
R_NC10_66_22, NC10, Bacteria

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comp(860..2326)
DNA (1467bp) protein (489aa)
speA; Arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_14473_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2437..3354)
DNA (918bp) protein (306aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
Spermidine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP1_9BACT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_14473_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3323..3715)
DNA (393bp) protein (131aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S-adenosylmethionine decarboxylase proenzyme Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP0_9BACT
S-adenosylmethionine decarboxylase
PLM4_65_b1_redo_sep16_scaffold_14473_5
unknown

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3929..4684
DNA (756bp) protein (252aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_14473_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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4835..5740
DNA (906bp) protein (302aa)
phosphodiesterase Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A285EB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_b1_redo_sep16_scaffold_14473_7
R_NC10_66_22, NC10, Bacteria

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6247..7347
DNA (1101bp) protein (367aa)
Capsular polysaccharide export protein, putative bin=GWC2_Methylomirabilis_70_16 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
capsular polysaccharide export protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_14473_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

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7356..8207
DNA (852bp) protein (284aa)
exopolysaccharide biosynthesis protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lipopolysaccharide biosynthesis protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_14473_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8251..10266
DNA (2016bp) protein (672aa)
lipopolysaccharide biosynthesis protein (EC:2.7.10.1)
Polysaccharide chain length determinant protein and protein tyrosine kinase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_14473_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10280..11692
DNA (1413bp) protein (471aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
O-antigen polymerase
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_14473_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11829..12191
DNA (363bp) protein (121aa)
ABC-2 type transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL6_SOLUE
ABC-2 type transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_14473_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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12242..12466
DNA (225bp) protein (75aa)
ABC-2 type transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XL6_SOLUE
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 12 items

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