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PLM4_65_b1_redo_sep16_scaffold_27583

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_27583_1
unknown

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comp(169..258)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_27583_2
R_NC10_66_22, NC10, Bacteria

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comp(258..1433)
DNA (1176bp) protein (392aa)
ribosomal L11 methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] bin=bin3_NC10 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
ribosomal L11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_27583_3
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(1436..2203)
DNA (768bp) protein (256aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
silent information regulator protein Sir2
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_27583_4
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2306..2566
DNA (261bp) protein (87aa)
Transcriptional regulator, AbrB family bin=GWF2_Lentisphaerae_50_93 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
AbrB family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_65_b1_redo_sep16_scaffold_27583_5
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2566..2973
DNA (408bp) protein (136aa)
Ribonuclease VapC Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G780_GEOUR
PilT domain-containing protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_65_b1_redo_sep16_scaffold_27583_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3156..4442)
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R914_METFO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88552.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_27583_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4624..5685)
DNA (1062bp) protein (354aa)
ald; Alanine dehydrogenase (Stage V sporulation protein N) (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183, ECO:0000313|EMBL:CBE70214.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Alanine dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN72_9BACT
PLM4_65_b1_redo_sep16_scaffold_27583_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5809..6054)
DNA (246bp) protein (82aa)
nadE; NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
NH(3)-dependent NAD(+) synthetase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIV6_9BACT
Displaying 8 items

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