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PLM4_65_b1_redo_sep16_scaffold_23620

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_23620_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3..212)
DNA (210bp) protein (70aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARS3_PELPD bin=16ft_combo_ws3_JS1 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Fis family transcriptional regulator
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_23620_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(368..2602)
DNA (2235bp) protein (745aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=RBG_16_Desulfobacca_60_12_curated
PLM4_65_b1_redo_sep16_scaffold_23620_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2906..4156)
DNA (1251bp) protein (417aa)
id=4362597 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_23620_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

4385..5032
DNA (648bp) protein (216aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_23620_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5331..5978)
DNA (648bp) protein (216aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_23620_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5975..7114)
DNA (1140bp) protein (380aa)
Eight transmembrane protein EpsH bin=GWF2_Methylomirabilis_70_14 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transmembrane protein EpsH
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_23620_7
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7220..8455)
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI00035CAD40
dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
PLM4_65_b1_redo_sep16_scaffold_23620_8
unknown

Not on your lists

8654..8755
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 8 items

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