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PLM4_65_b1_redo_sep16_scaffold_3546

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3546_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1..387)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH74_IGNAJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(470..1591)
DNA (1122bp) protein (374aa)
waaC; ADP-heptose--LPS heptosyltransferase (EC:2.-.-.-)
ADP-heptose:LPS heptosyl transferase I Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG17_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1566..3257)
DNA (1692bp) protein (564aa)
rfaF_gmhB; bifunctional lipopolysaccharide heptosyltransferase II/D, D-heptose 1,7-bisphosphate phosphatase (EC:2.4.-.- 3.1.3.-)
Lipopolysaccharide heptosyltransferase II and D, D-heptose 1,7-bisphosphate phosphatase (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PHJ0_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3318..4295)
DNA (978bp) protein (326aa)
Lipid A biosynthesis acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG19_9BACT
Lipid A biosynthesis acyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4288..5415)
DNA (1128bp) protein (376aa)
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG20_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5412..6674)
DNA (1263bp) protein (421aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6794..7471)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG22_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7487..8608)
DNA (1122bp) protein (374aa)
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8748..9686)
DNA (939bp) protein (313aa)
Predicted dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG24_9BACT
dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9796..10596)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG25_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10603..11379)
DNA (777bp) protein (259aa)
lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG26_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11389..11859)
DNA (471bp) protein (157aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG27_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11882..12907)
DNA (1026bp) protein (342aa)
lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG28_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13056..13559)
DNA (504bp) protein (168aa)
Putative Outer membrane chaperone Skp (OmpH) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG29_9BACT
Outer membrane chaperone Skp (OmpH)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13724..16015)
DNA (2292bp) protein (764aa)
Putative Surface antigen (D15) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG30_9BACT
Surface antigen (D15)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(16176..18611)
DNA (2436bp) protein (812aa)
Chaperone Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG31_9BACT
clpB; chaperone
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18767..19441)
DNA (675bp) protein (225aa)
Lipoprotein-releasing system (ABC transporter), ATP-binding protein lolD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG32_9BACT
lolD; lipoprotein-releasing system ABC transporter ATP-binding protein lolD
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19524..20807)
DNA (1284bp) protein (428aa)
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein bin=bin3_NC10 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20962..22470)
DNA (1509bp) protein (503aa)
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22664..22906)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Nitrobacter sp. Nb-311A RepID=A3X2W0_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3546_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22979..23338)
DNA (360bp) protein (120aa)
Peptide chain release factor 2 (RF-2) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKV0_9BACT
prfB; peptide chain release factor 2 (RF-2)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 21 items

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