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PLM4_65_b1_redo_sep16_scaffold_3706

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3706_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)
Uroporphyrinogen decarboxylase (URO-D) bin=GWF2_Methylomirabilis_70_14 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(230..934)
DNA (705bp) protein (235aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=Desulfovibrio vulgaris RepID=A1VG43_DESVV
branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(927..1703)
DNA (777bp) protein (259aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PMX2_9FIRM
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1700..2701)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI00031277A9
putative high-affinity branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2705..3571)
DNA (867bp) protein (289aa)
ABC-type transporter, integral membrane subunit Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LU64_TEPAE
livH; leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3666..4793)
DNA (1128bp) protein (376aa)
Receptor family ligand-binding protein Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1T2_9CLOT
livK; branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_7
unknown

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comp(4790..4939)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3706_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5230..5637)
DNA (408bp) protein (136aa)
OsmC-like protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F954_ACIC5
OsmC-like protein
OsmC-like protein {ECO:0000313|EMBL:ACO32250.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM4_65_b1_redo_sep16_scaffold_3706_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(5738..6898)
DNA (1161bp) protein (387aa)
LL-diaminopimelate aminotransferase Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DXF6_9FIRM
aminotransferase, class I and II
Tax=RBG_16_Chloroflexi_64_32_curated
PLM4_65_b1_redo_sep16_scaffold_3706_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(7677..9449)
DNA (1773bp) protein (591aa)
Putative Membrane-bound lytic murein transglycosylase D Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML04_9BACT
Membrane-bound lytic murein transglycosylase D
Putative Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:CBE69844.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3706_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9736..10068)
DNA (333bp) protein (111aa)
CutA1 divalent ion tolerance protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLE5_MARHT
CutA1 divalent ion tolerance protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10167..11342)
DNA (1176bp) protein (392aa)
protease Do (EC:3.4.21.107); K01362 [EC:3.4.21.-] bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protease Do (EC:3.4.21.108)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

11613..13532
DNA (1920bp) protein (640aa)
Chaperone protein DnaK Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML02_9BACT
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13600..14046
DNA (447bp) protein (149aa)
Heat shock protein Hsp20 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Heat shock protein Hsp20
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_3706_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14262..14576
DNA (315bp) protein (105aa)
heat shock protein Hsp20; K13993 HSP20 family protein bin=bin3_NC10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
heat shock protein Hsp20
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_3706_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

14611..15726
DNA (1116bp) protein (372aa)
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_3706_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

15819..16193
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKZ8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 17 items

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