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PLM4_65_b1_redo_sep16_scaffold_676

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_676_1
unknown

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_676_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(213..1538)
DNA (1326bp) protein (442aa)
FeS-containing oxidoreductase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HSE4_CYAP4
FeS-containing oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_3
unknown

Not on your lists

comp(1554..1727)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_676_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1727..2260)
DNA (534bp) protein (178aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET8_9BACT
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2271..3374)
DNA (1104bp) protein (368aa)
GTPase HflX Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET7_9BACT
hflX; GTPase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3409..4326)
DNA (918bp) protein (306aa)
tyrC; protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydrogenase (PDH) (EC:1.3.1.43 1.3.1.12)
Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH) Prephenate dehydrogenase (PDH) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET6_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4380..5393)
DNA (1014bp) protein (338aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5515..6621)
DNA (1107bp) protein (369aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET4_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6662..7741)
DNA (1080bp) protein (360aa)
pheA; bifunctional chorismate mutase/prephenate dihydratase (EC:4.2.1.51 5.4.99.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
pheA; bifunctional chorismate mutase/prephenate dihydratase (EC:4.2.1.51 5.4.99.5)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7848..8651)
DNA (804bp) protein (268aa)
RNA pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET2_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8692..9417)
DNA (726bp) protein (242aa)
scpB; Segregation and condensation protein B
scpB; Segregation and condensation protein B bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9421..10167)
DNA (747bp) protein (249aa)
Segregation and condensation protein A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET0_9BACT
scpA; segregation and condensation protein A
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10164..10640)
DNA (477bp) protein (159aa)
Helix-hairpin-helix DNA-binding, class 1 Tax=Frankia sp. (strain CcI3) RepID=Q2JDK7_FRASC
helix-hairpin-helix DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10637..11875)
DNA (1239bp) protein (413aa)
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES8_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11957..12589)
DNA (633bp) protein (211aa)
Glycerol-3-phosphate acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12720..13253)
DNA (534bp) protein (178aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES6_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13272..14087)
DNA (816bp) protein (272aa)
General secretion pathway protein-related protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H864_ANADF
general secretion pathway protein-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14118..17633)
DNA (3516bp) protein (1172aa)
Tetratricopeptide repeat protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17811..18614)
DNA (804bp) protein (268aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] bin=bin3_NC10 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18637..19554)
DNA (918bp) protein (306aa)
Peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_676_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19547..20497)
DNA (951bp) protein (317aa)
Peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_676_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20579..22234)
DNA (1656bp) protein (552aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_676_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22273..22554)
DNA (282bp) protein (94aa)
phosphocarrier protein HPr Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003627BE5
phosphoryl transfer system, HPr
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22551..22916)
DNA (366bp) protein (122aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3C066
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_25
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22889..23143)
DNA (255bp) protein (85aa)
alpha-amylase (EC:3.2.1.1); K07405 alpha-amylase [EC:3.2.1.1] bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
4-alpha-glucanotransferase (EC:2.4.1.25)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_26
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(23166..23591)
DNA (426bp) protein (142aa)
PTS system fructose subfamily IIA component Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6M5_ANADF
PTS system fructose subfamily transporter subunit IIA
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_27
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(23697..24563)
DNA (867bp) protein (289aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(24659..25255)
DNA (597bp) protein (199aa)
HPr kinase/phosphorylase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IM88_ANADE
HPr kinase/phosphorylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(25273..25800)
DNA (528bp) protein (176aa)
protein DR_1082 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protein DR_1082
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_676_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(25959..27395)
DNA (1437bp) protein (479aa)
rpoN; RNA polymerase sigma-54 factor bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpoN; RNA polymerase sigma-54 factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying items 1-30 of 41 in total

View Taxonomy