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PLM4_65_b1_redo_sep16_scaffold_8402

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8402_1
R_NC10_66_22, NC10, Bacteria

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2..139
DNA (138bp) protein (46aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B60F6D
Fis family two component sigma54 specific transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_8402_2
R_NC10_66_22, NC10, Bacteria

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comp(200..2338)
DNA (2139bp) protein (713aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_8402_3
R_NC10_66_22, NC10, Bacteria

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comp(2341..3411)
DNA (1071bp) protein (357aa)
hypothetical protein bin=bin7_NC10_sister species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_8402_4
R_NC10_66_22, NC10, Bacteria

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comp(3471..4415)
DNA (945bp) protein (315aa)
putative methanol dehydrogenase regulatory protein MoxR; K03924 MoxR-like ATPase [EC:3.6.3.-] bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
ATPase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_8402_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4748..6352)
DNA (1605bp) protein (535aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_8402_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6405..7286)
DNA (882bp) protein (294aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETW96144.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter permease bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
binding-protein-dependent transport system inner membrane protein
PLM4_65_b1_redo_sep16_scaffold_8402_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7327..8268)
DNA (942bp) protein (314aa)
ABC transporter, permease protein Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQM3_9PROT
Peptide ABC transporter {ECO:0000313|EMBL:ETW96143.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
peptide ABC transporter
PLM4_65_b1_redo_sep16_scaffold_8402_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8345..9931)
DNA (1587bp) protein (529aa)
ABC transporter substrate-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TPE3_9PROT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETW96142.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
extracellular solute-binding s, 5 Middle family protein
PLM4_65_b1_redo_sep16_scaffold_8402_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10410..10754)
DNA (345bp) protein (115aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI0003640188
uroporphyrinogen-III decarboxylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 9 items

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