ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_9139

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9139_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
response regulator receiver protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(319..1539)
DNA (1221bp) protein (407aa)
Phosphofructokinase (EC:2.7.1.90)
Phosphofructokinase Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZK5_9FIRM
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1929..2900)
DNA (972bp) protein (324aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] bin=bin3_NC10 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin3_NC10 organism_group=NC10
6-phosphofructokinase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_9139_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

3441..4397
DNA (957bp) protein (319aa)
cbbF; fructose 1,6-bisphosphatase, class II (EC:3.1.3.11) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cbbF; fructose 1,6-bisphosphatase, class II (EC:3.1.3.11)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_5
R_NC10_66_22, NC10, Bacteria

Not on your lists


4484..5755
DNA (1272bp) protein (424aa)
hisS; histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) (EC:6.1.1.21) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hisS; histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) (EC:6.1.1.21)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists


5755..7524
DNA (1770bp) protein (590aa)
aspS; Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) (EC:6.1.1.22 6.1.1.12)
Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) {ECO:0000313|EMBL:CBE70061.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CBE70061.1};; EC=6.1.1.22 {ECO:0000313|EMBL:CBE70061.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Aspartate--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMD9_9BACT
PLM4_65_b1_redo_sep16_scaffold_9139_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7699..8583)
DNA (885bp) protein (295aa)
Tyrosine recombinase XerD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME9_9BACT
xerD; tyrosine recombinase XerD
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8724..9914)
DNA (1191bp) protein (397aa)
Putative Glycosyl transferase, group 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF0_9BACT
Glycosyl transferase, group 1
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10084..10296)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF1_9BACT
membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10272..11672)
DNA (1401bp) protein (467aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF1_9BACT
membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11647..12147)
DNA (501bp) protein (167aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W5I8_DESOD
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9139_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12349..12804)
DNA (456bp) protein (152aa)
GCN5-related N-acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
N-acetyltransferase GCN5
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 12 items

View Taxonomy