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PLM4_65_b1_redo_sep16_scaffold_9595

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9595_1
R_NC10_66_22, NC10, Bacteria

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comp(51..335)
DNA (285bp) protein (95aa)
id=14430569 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9595_2
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(639..1982)
DNA (1344bp) protein (448aa)
Sigma-54 factor interaction domain-containing protein Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VVJ0_DESAO
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADU63548.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
PLM4_65_b1_redo_sep16_scaffold_9595_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2434..3264)
DNA (831bp) protein (277aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09A97_STIAD
PLM4_65_b1_redo_sep16_scaffold_9595_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3307..3699)
DNA (393bp) protein (131aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_9595_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3912..4442
DNA (531bp) protein (177aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037DC12A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69265.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_9595_6
unknown

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4439..4672
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9595_7
R_WOR_2_67_20, WOR-2, Bacteria

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4660..4968
DNA (309bp) protein (103aa)
dioxygenase, ferredoxin subunit bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
dioxygenase, ferredoxin subunit
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
PLM4_65_b1_redo_sep16_scaffold_9595_8
R_Omnitrophica_50_24, Omnitrophica, Bacteria

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4994..5302
DNA (309bp) protein (103aa)
dioxygenase, ferredoxin subunit
dioxygenase, ferredoxin subunit bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
PLM4_65_b1_redo_sep16_scaffold_9595_9
CSP1_5_NC10, NC10, Bacteria

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comp(5426..6352)
DNA (927bp) protein (309aa)
amidohydrolase; K07045 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
amidohydrolase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_9595_10
R_NC10_66_22, NC10, Bacteria

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comp(6349..7557)
DNA (1209bp) protein (403aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9595_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

7868..8803
DNA (936bp) protein (312aa)
cytochrome c Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002893947
diheme cytochrome C-type
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9595_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

9079..9744
DNA (666bp) protein (222aa)
id=14626551 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_9595_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

9826..10041
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 13 items

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