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PLM4_65_b1_redo_sep16_scaffold_4440

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4440_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3..140
DNA (138bp) protein (46aa)
Elongation factor Tu Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK17_9BACT
tufB; Elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4440_2
R_NC10_66_22, NC10, Bacteria

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240..389
DNA (150bp) protein (50aa)
50S ribosomal protein L33 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVX4_9PROT
rpmG; 50S ribosomal protein L33
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_trna_1
unknown

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476..548
DNA (73bp)
transferRNA Trp
PLM4_65_b1_redo_sep16_scaffold_4440_3
R_NC10_66_22, NC10, Bacteria

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666..881
DNA (216bp) protein (72aa)
secE; preprotein translocase subunit secE bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
secE; preprotein translocase subunit secE
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_4
R_NC10_66_22, NC10, Bacteria

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910..1551
DNA (642bp) protein (214aa)
Transcription termination/antitermination protein NusG Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK20_9BACT
nusG; component in transcription antitermination
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_5
R_NC10_66_22, NC10, Bacteria

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1641..2066
DNA (426bp) protein (142aa)
rplK; 50S ribosomal protein L11 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplK; 50S ribosomal protein L11
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_6
R_NC10_66_22, NC10, Bacteria

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2211..2930
DNA (720bp) protein (240aa)
50S ribosomal protein L1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK22_9BACT
rplA; 50S ribosomal protein L1
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_7
R_NC10_66_22, NC10, Bacteria

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2943..3467
DNA (525bp) protein (175aa)
50S ribosomal protein L10 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4J5_DESDJ
50S ribosomal protein L10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_8
R_NC10_66_22, NC10, Bacteria

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3554..3943
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK24_9BACT
rplL; 50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_9
R_NC10_66_22, NC10, Bacteria

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3957..7919
DNA (3963bp) protein (1321aa)
rpoB; RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK25_9BACT
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

8003..12112
DNA (4110bp) protein (1370aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_11
R_NC10_66_22, NC10, Bacteria

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12201..12578
DNA (378bp) protein (126aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
rpsL; 30S ribosomal protein S12
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_12
R_NC10_66_22, NC10, Bacteria

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12697..13167
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK28_9BACT
rpsG; 30S ribosomal protein S7
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

13252..15429
DNA (2178bp) protein (726aa)
Elongation factor G Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK29_9BACT
fusA; elongation factor G
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4440_14
RBG_16_NC10_65_8_curated, NC10, Bacteria

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15390..15527
DNA (138bp) protein (46aa)
Elongation factor Tu Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK17_9BACT
tufB; Elongation factor Tu (EF-Tu)
Tax=RBG_16_NC10_65_8_curated
Displaying 15 items

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