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PLM4_65_b1_redo_sep16_scaffold_11234

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11234_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

323..1609
DNA (1287bp) protein (429aa)
TRAP transporter DctM-like subunit Tax=Alishewanella agri BL06 RepID=I9NZF3_9ALTE
membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1852..2247
DNA (396bp) protein (132aa)
Ferredoxin bin=GWD2_Deltaproteobacteria_55_8 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fdx4; ferredoxin, 2Fe-2S
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_11234_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

2365..3888
DNA (1524bp) protein (508aa)
Aldehyde dehydrogenase B Tax=uncultured bacterium A1Q1_fos_1246 RepID=L7W0A1_9BACT
pcd; piperideine-6-carboxylate dehydrogenase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_11234_5
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4025..4729
DNA (705bp) protein (235aa)
putative O-methyltransferase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-methyltransferase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_65_b1_redo_sep16_scaffold_11234_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4954..5214
DNA (261bp) protein (87aa)
id=3847105 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_11234_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5627
DNA (417bp) protein (139aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM4_65_b1_redo_sep16_scaffold_11234_8
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..6646)
DNA (861bp) protein (287aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] bin=bin5_DeltaP species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
Tax=CSP1_8_Deltaproteobacteria
PLM4_65_b1_redo_sep16_scaffold_11234_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6744..7520)
DNA (777bp) protein (259aa)
metallo-phosphoesterase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
metallo-phosphoesterase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7628..9184)
DNA (1557bp) protein (519aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(9763..10059)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGM4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10070..10363)
DNA (294bp) protein (98aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037124E7
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_11234_13
R_NC10_66_22, NC10, Bacteria

Not on your lists


comp(10492..12084)
DNA (1593bp) protein (531aa)
atm:ANT_24980 pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 13 items

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