ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_66629

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_66629_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
pleD; response regulator With diguanylate cyclase (GGDEF) domain protein bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
Fis family transcriptional regulator
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_66629_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(447..1208)
DNA (762bp) protein (254aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_66629_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1387..2388
DNA (1002bp) protein (334aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding bin=GWC2_Methylomirabilis_70_24 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_66629_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2525..3712)
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tryptophan synthase subunit beta
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 4 items

View Taxonomy