ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3183

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3183_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

1..870
DNA (870bp) protein (290aa)
GTPase Era Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME4_9BACT
era; GTP-binding protein (era)
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3183_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

995..1753
DNA (759bp) protein (253aa)
DNA repair protein RecO Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME5_9BACT
DNA repair protein recO (Recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3183_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

1891..2793
DNA (903bp) protein (301aa)
glyQ; glycine tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glycine--tRNA ligase alpha subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK95_9BACT
PLM4_65_b1_redo_sep16_scaffold_3183_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

2818..4890
DNA (2073bp) protein (691aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
glyS; glycine tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK96_9BACT
PLM4_65_b1_redo_sep16_scaffold_3183_5
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

5090..8065
DNA (2976bp) protein (992aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
Phosphoenolpyruvate synthase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A7Z4_THEID
phosphoenolpyruvate synthase
PLM4_65_b1_redo_sep16_scaffold_3183_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

8231..8881
DNA (651bp) protein (217aa)
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) {ECO:0000313|EMBL:CBE69719.1}; EC=2.4.2.10 {ECO:0000313|EMBL:CBE69719.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK97_9BACT
PLM4_65_b1_redo_sep16_scaffold_3183_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

8935..9294
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK98_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69720.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3183_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9303..10082
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK99_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69721.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3183_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10216..10590)
DNA (375bp) protein (125aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Transcriptional coactivator/pterin dehydratase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA0_9BACT
transcriptional coactivator/pterin dehydratase
PLM4_65_b1_redo_sep16_scaffold_3183_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(11162..12361)
DNA (1200bp) protein (400aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA1_9BACT
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_3183_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(12393..14402)
DNA (2010bp) protein (670aa)
cbbT; transketolase (TK) (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996, ECO:0000313|EMBL:CBE69724.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Transketolase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
PLM4_65_b1_redo_sep16_scaffold_3183_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14518..15612)
DNA (1095bp) protein (365aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {ECO:0000313|EMBL:CBE69725.1}; EC=1.2.1.12 {ECO:0000313|EMBL:CBE69725.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA3_9BACT
PLM4_65_b1_redo_sep16_scaffold_3183_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(15616..16602)
DNA (987bp) protein (329aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoribulokinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA4_9BACT
Phosphoribulokinase/uridine kinase family
PLM4_65_b1_redo_sep16_scaffold_3183_14
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16669..17382)
DNA (714bp) protein (238aa)
tal; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Probable transaldolase Tax=Caldicellulosiruptor RepID=E4S9A7_CALKI
PLM4_65_b1_redo_sep16_scaffold_3183_15
unknown

Not on your lists

comp(17404..17604)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 15 items

View Taxonomy