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PLM4_65_b1_redo_sep16_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_516_1
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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81..1025
DNA (945bp) protein (315aa)
CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP-like protein Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FA34_9LEPT
CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP-like protein {ECO:0000313|EMBL:EQA44751.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
CRISPR-associated negative autoregulator
PLM4_65_b1_redo_sep16_scaffold_516_2
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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1036..1662
DNA (627bp) protein (209aa)
CRISPR-associated protein Cas5/DevS, subtype MYXAN Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GBN0_9LEPT
CRISPR-associated protein Cas5/DevS, subtype MYXAN {ECO:0000313|EMBL:EQA44214.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
fruiting body developmental protein S-like protein
PLM4_65_b1_redo_sep16_scaffold_516_3
unknown

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comp(1616..1843)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_516_4
unknown

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2630..3442
DNA (813bp) protein (271aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_516_5
unknown

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3446..4039
DNA (594bp) protein (198aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_516_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4316..4732)
DNA (417bp) protein (139aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_516_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(4732..4998)
DNA (267bp) protein (89aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_516_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5292..6035
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML54_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69896.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6702..7838
DNA (1137bp) protein (379aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Epoxyqueuosine reductase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML55_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_516_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8025..8735)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML56_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69898.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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8816..9412
DNA (597bp) protein (199aa)
molybdopterin-binding oxidoreductase; K07147 bin=bin9_gal15 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
molybdopterin binding oxidoreductase
Tax=CSP1_3_Armatimonadetes
PLM4_65_b1_redo_sep16_scaffold_516_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9752..11230
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Periplasmic sensor signal transduction histidine kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML69_9BACT
periplasmic sensor signal transduction histidine kinase
PLM4_65_b1_redo_sep16_scaffold_516_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11230..12672
DNA (1443bp) protein (481aa)
Acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML70_9BACT
atoC; acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme)
Acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) {ECO:0000313|EMBL:CBE69912.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12974..13525
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML72_9BACT
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CBE69914.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13550..14257
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML73_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69915.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

14242..14874
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML74_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69916.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_17
R_NC10_66_22, NC10, Bacteria

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14940..16127
DNA (1188bp) protein (396aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_516_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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16234..17205
DNA (972bp) protein (324aa)
Import inner membrane translocase, subunit Tim44 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME8_9BACT
hypothetical protein
Import inner membrane translocase, subunit Tim44 {ECO:0000313|EMBL:CBE70070.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_19
RBG_16_NC10_65_8_curated, NC10, Bacteria

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comp(17331..17534)
DNA (204bp) protein (68aa)
cspA; Cold shock protein, DNA binding bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cspA; Cold shock protein, DNA binding
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_516_20
R_NC10_66_22, NC10, Bacteria

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comp(17765..20095)
DNA (2331bp) protein (777aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_516_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

20716..21588
DNA (873bp) protein (291aa)
galU; glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259, ECO:0000313|EMBL:CBE69698.1};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glucose-1-phosphate uridylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK76_9BACT
PLM4_65_b1_redo_sep16_scaffold_516_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

21594..24140
DNA (2547bp) protein (849aa)
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Lon protease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK75_9BACT
PLM4_65_b1_redo_sep16_scaffold_516_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

24133..25800
DNA (1668bp) protein (556aa)
rnjA; ribonuclease J 1 (RNase J1) (EC:3.1.-.-)
Ribonuclease J 1 (RNase J1) {ECO:0000313|EMBL:CBE69696.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBE69696.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ribonuclease J 1 (RNase J1) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK74_9BACT
PLM4_65_b1_redo_sep16_scaffold_516_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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25816..28080
DNA (2265bp) protein (755aa)
DNA translocase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK73_9BACT
ftsK; DNA translocase
DNA translocase {ECO:0000313|EMBL:CBE69695.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

28084..28824
DNA (741bp) protein (247aa)
Putative Outer-membrane lipoprotein carrier protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK72_9BACT
Outer-membrane lipoprotein carrier protein
Putative Outer-membrane lipoprotein carrier protein {ECO:0000313|EMBL:CBE69694.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_26
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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28981..29472
DNA (492bp) protein (164aa)
UPF0234 protein DAMO_2620 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK71_9BACT
hypothetical protein
UPF0234 protein DAMO_2620 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

29556..31976
DNA (2421bp) protein (807aa)
Diguanylate kinase (EC:2.7.7.65)
Putative Diguanylate kinase {ECO:0000313|EMBL:CBE69692.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CBE69692.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Diguanylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK70_9BACT
PLM4_65_b1_redo_sep16_scaffold_516_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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31996..32493
DNA (498bp) protein (166aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000376015D
phosphatidylglycerophosphatase A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_516_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

32506..33762
DNA (1257bp) protein (419aa)
CinA-like protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK69_9BACT
cinA; competence-damage inducible protein
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_516_30
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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33764..34357
DNA (594bp) protein (198aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK68_9BACT
hypothetical protein
Displaying items 1-30 of 43 in total

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