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PLM4_65_b1_redo_sep16_scaffold_690

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_690_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1..1116
DNA (1116bp) protein (372aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) {ECO:0000313|EMBL:CBE68702.1}; EC=2.-.-.- {ECO:0000313|EMBL:CBE68702.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG21_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1113..2237
DNA (1125bp) protein (375aa)
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Tetraacyldisaccharide 4'-kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG20_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2234..3193
DNA (960bp) protein (320aa)
Lipid A biosynthesis acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG19_9BACT
Lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:CBE68700.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3311..4999
DNA (1689bp) protein (563aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
ADP-heptose--LPS heptosyltransferase II (Modular protein) {ECO:0000313|EMBL:CBE68699.1}; EC=2.-.-.- {ECO:0000313|EMBL:CBE68699.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ADP-heptose--LPS heptosyltransferase II (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG18_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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5202..6341
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1Z3F6_9BACT
ADP-heptose--LPS heptosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM4_65_b1_redo_sep16_scaffold_690_6
R_NC10_66_22, NC10, Bacteria

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6408..7382
DNA (975bp) protein (325aa)
NDP-sugar oxidoreductase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYI4_SORC5
NDP-sugar oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_690_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7403..8206
DNA (804bp) protein (268aa)
MEMO1 family protein DAMO_1639 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG16_9BACT
hypothetical protein
MEMO1 family protein DAMO_1639 {ECO:0000256|HAMAP-Rule:MF_00055}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8283..9476
DNA (1194bp) protein (398aa)
Uncharacterized protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0C3_METMA
putative cell surface protein
40-residue YVTN family beta-propeller {ECO:0000313|EMBL:EOP81049.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB4-4.;"
PLM4_65_b1_redo_sep16_scaffold_690_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9935..10852)
DNA (918bp) protein (306aa)
selD; Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Selenide, water dikinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG14_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(11014..11643)
DNA (630bp) protein (210aa)
Putative Membrane-associated phospholipid phosphatase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG13_9BACT
Membrane-associated phospholipid phosphatase
Putative Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:CBE68694.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(11658..12635)
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG12_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68693.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(12622..13641)
DNA (1020bp) protein (340aa)
Glycosyl transferase, family 2 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG11_9BACT
glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBE68692.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_13
R_NC10_66_22, NC10, Bacteria

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comp(13747..15309)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_690_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(15347..15886)
DNA (540bp) protein (180aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC) (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG08_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(15858..17135)
DNA (1278bp) protein (426aa)
purD; phosphoribosylamine--glycine ligase (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138, ECO:0000313|EMBL:CBE68688.1};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoribosylamine--glycine ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG07_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(17169..18773)
DNA (1605bp) protein (535aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG06_9BACT
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(18770..19441)
DNA (672bp) protein (224aa)
purN; phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBE68686.1};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG05_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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19960..20409
DNA (450bp) protein (150aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY3_9BACT
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBE68083.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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20536..21450
DNA (915bp) protein (305aa)
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBE68084.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pyridoxal-phosphate (PLP) dependent enzymes family subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY4_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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21470..22618
DNA (1149bp) protein (383aa)
Putative Molybdopterin biosynthesis protein moeB (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY5_9BACT
Molybdopterin biosynthesis protein moeB
Putative Molybdopterin biosynthesis protein moeB (Modular protein) {ECO:0000313|EMBL:CBE68085.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_21
CSP1_5_NC10, NC10, Bacteria

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22638..22919
DNA (282bp) protein (94aa)
permease; K07112 bin=bin3_NC10 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
permease
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_690_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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22953..23654
DNA (702bp) protein (234aa)
Putative permease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY6_9BACT
permease
Putative permease {ECO:0000313|EMBL:CBE68086.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_23
CSP1_5_NC10, NC10, Bacteria

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23620..24549
DNA (930bp) protein (310aa)
Rhodanese-related sulfurtransferase-like protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Rhodanese-related sulfurtransferase-like protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_690_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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24564..24791
DNA (228bp) protein (76aa)
SirA family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY7_9BACT
SirA family protein
SirA family protein {ECO:0000313|EMBL:CBE68087.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_25
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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24853..25824
DNA (972bp) protein (324aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO35420.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_690_26
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

25847..26092
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68088.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

26215..27150
DNA (936bp) protein (312aa)
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
Pyridoxal-phosphate (PLP) dependent enzymes family subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) {ECO:0000313|EMBL:CBE68089.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CBE68089.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Pyridoxal-phosphate (PLP) dependent enzymes family subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMY9_9BACT
PLM4_65_b1_redo_sep16_scaffold_690_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

27152..27628
DNA (477bp) protein (159aa)
Putative Mov34/MPN/PAD-1 family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ0_9BACT
Mov34/MPN/PAD-1 family protein
Putative Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:CBE68090.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_690_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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27730..29427
DNA (1698bp) protein (566aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003741C12
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:ABF41374.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_690_30
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

29706..30641
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMZ1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68091.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying items 1-30 of 35 in total

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