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PLM4_65_b1_redo_sep16_scaffold_4019

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4019_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3..236)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM32_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67918.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4019_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(758..1855)
DNA (1098bp) protein (366aa)
putative Zn-dependent hydrolase of beta-lactamase fold protein bin=bin7_NC10_sister species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Zn-dependent hydrolase of beta-lactamase fold protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_4019_3
R_NC10_66_22, NC10, Bacteria

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comp(1855..2751)
DNA (897bp) protein (299aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4019_4
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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comp(2762..3277)
DNA (516bp) protein (172aa)
peptidyl-prolyl cis-trans isomerase bin=bin7_NC10_sister species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
PLM4_65_b1_redo_sep16_scaffold_4019_5
R_NC10_66_22, NC10, Bacteria

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3457..4431
DNA (975bp) protein (325aa)
peptidase S58 DmpA bin=RBG_19FT_COMBO_GAL15_69_19 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptidase S58
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4019_6
R_NC10_66_22, NC10, Bacteria

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comp(4428..4829)
DNA (402bp) protein (134aa)
Histidine kinase Tax=Oscillochloris trichoides DG-6 RepID=E1II26_9CHLR
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4019_7
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5364..5984
DNA (621bp) protein (207aa)
Transcriptional regulator, XRE family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA62_GEOUR
XRE family transcriptional regulator
Tax=CG_Desulfob_01
PLM4_65_b1_redo_sep16_scaffold_4019_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5991..6197)
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS4_9BACT
tatA; Sec-independent protein translocase protein tatA/E-like protein
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4019_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(6222..8135)
DNA (1914bp) protein (638aa)
Selenocysteine-specific elongation factor (SelB translation factor) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS3_9BACT
selB; Selenocysteine-specific elongation factor (SelB translation factor)
Selenocysteine-specific elongation factor (SelB translation factor) {ECO:0000313|EMBL:CBE67206.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4019_10
unknown

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8438..8782
DNA (345bp) protein (115aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4019_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9123..10697
DNA (1575bp) protein (525aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBE69867.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Histidine kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML25_9BACT
PLM4_65_b1_redo_sep16_scaffold_4019_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10694..12085
DNA (1392bp) protein (464aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML24_9BACT
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE69866.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4019_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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12518..13441
DNA (924bp) protein (308aa)
pyrroloquinoline quinone biosynthesis protein PqqB Tax=Saccharopolyspora spinosa RepID=UPI000237B0B0
pyrroloquinoline quinone biosynthesis protein PqqB
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM4_65_b1_redo_sep16_scaffold_4019_14
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13463..14200
DNA (738bp) protein (246aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00037366EC
pyrroloquinoline quinone biosynthesis protein PqqC
PLM4_65_b1_redo_sep16_scaffold_4019_15
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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14197..14505
DNA (309bp) protein (103aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00036C39D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY87998.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM4_65_b1_redo_sep16_scaffold_4019_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14506..15627
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YFB4_SORCE
hypothetical protein
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Displaying 16 items

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