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PLM4_65_b1_redo_sep16_scaffold_4808

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4808_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2..451
DNA (450bp) protein (150aa)
Radical SAM domain protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHC2_9BACT
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:CBE69154.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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523..2055
DNA (1533bp) protein (511aa)
rng; ribonuclease G (Cytoplasmic axial filament protein) (EC:3.1.4.-)
Ribonuclease G (RNase G) (Cytoplasmic axial filament protein) {ECO:0000313|EMBL:CBE69153.1}; EC=3.1.4.- {ECO:0000313|EMBL:CBE69153.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ribonuclease G (RNase G) (Cytoplasmic axial filament protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHC1_9BACT
PLM4_65_b1_redo_sep16_scaffold_4808_3
unknown

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2057..2347
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4808_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2661..2972
DNA (312bp) protein (104aa)
50S ribosomal protein L21 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ53_9BACT
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3072..3326
DNA (255bp) protein (85aa)
50S ribosomal protein L27 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ54_9BACT
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3443..4555
DNA (1113bp) protein (371aa)
GTPase Obg Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ55_9BACT
obgE; GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4552..5706
DNA (1155bp) protein (385aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glutamate 5-kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ56_9BACT
PLM4_65_b1_redo_sep16_scaffold_4808_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5811..7088
DNA (1278bp) protein (426aa)
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000313|EMBL:CBE67422.1};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Gamma-glutamyl phosphate reductase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ57_9BACT
PLM4_65_b1_redo_sep16_scaffold_4808_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7183..7887
DNA (705bp) protein (235aa)
nadD; nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CBE67423.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Probable nicotinate-nucleotide adenylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ58_9BACT
PLM4_65_b1_redo_sep16_scaffold_4808_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7884..8288
DNA (405bp) protein (135aa)
Ribosomal silencing factor RsfS Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ59_9BACT
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8495..8860
DNA (366bp) protein (122aa)
Transcriptional regulators, TraR/DksA family Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ60_9BACT
transcriptional regulators, TraR/DksA family
Transcriptional regulators, TraR/DksA family {ECO:0000313|EMBL:CBE67425.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9325..9822
DNA (498bp) protein (166aa)
Putative competence protein F (COMF) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ61_9BACT
hypothetical protein
Putative competence protein F (COMF) {ECO:0000313|EMBL:CBE67426.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_4808_13
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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10065..11138
DNA (1074bp) protein (358aa)
bacillolysin (EC:3.4.24.28)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037BA655
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_b1_redo_sep16_scaffold_4808_14
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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11230..11547
DNA (318bp) protein (106aa)
hypothetical protein Tax=Microchaete sp. PCC 7126 RepID=UPI0003457B55
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM4_65_b1_redo_sep16_scaffold_4808_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11831..12832
DNA (1002bp) protein (334aa)
cbbG; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ64_9BACT
PLM4_65_b1_redo_sep16_scaffold_4808_16
CSP1_5_NC10, NC10, Bacteria

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12930..14117
DNA (1188bp) protein (396aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] bin=bin3_NC10 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
cbbK; phosphoglycerate kinase, partial 3' end (EC:2.7.2.3)
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_4808_17
unknown

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comp(13953..14324)
DNA (372bp) protein (124aa)

This feature has no annotations

Displaying 17 items

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