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PLM4_65_b1_redo_sep16_scaffold_1355

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1355_1
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(3..1346)
DNA (1344bp) protein (448aa)
ftsH; cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH Tax=Desulfococcus multivorans DSM 2059 RepID=S7V8D6_DESML
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_65_b1_redo_sep16_scaffold_1355_2
unknown

Not on your lists

2175..2753
DNA (579bp) protein (193aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1355_3
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2849..4342
DNA (1494bp) protein (498aa)
RNA polymerase sigma factor RpoD Tax=Geobacter sulfurreducens RepID=D7AEN1_GEOSK
rpoD; RNA polymerase sigma-70 factor RpoD
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM4_65_b1_redo_sep16_scaffold_1355_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

4393..5370
DNA (978bp) protein (326aa)
phaC; PHA synthase PhaC; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] bin=bin1_lowGC species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Poly(3-hydroxyalkanoate) synthetase
Tax=CSP1_2_Dadabacteria
PLM4_65_b1_redo_sep16_scaffold_1355_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5224..6696)
DNA (1473bp) protein (491aa)
CoA-substrate-specific enzyme activase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin7_NC10_sister organism_group=NC10
CoA-substrate-specific enzyme activase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_1355_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6696..9689)
DNA (2994bp) protein (998aa)
CoA-substrate-specific enzyme activase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
CoA-substrate-specific enzyme activase
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_1355_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9701..11437)
DNA (1737bp) protein (579aa)
Putative HAD superfamily hydrolase bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative HAD superfamily hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_1355_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11452..11958)
DNA (507bp) protein (169aa)
Radical SAM domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHV2_ANADF
radical SAM domain-containing protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_1355_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12202..13311)
DNA (1110bp) protein (370aa)
fbpV; fructose-1,6-bisphosphatase, class V (EC:3.1.3.11); K01622 fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_1355_10
unknown

Not on your lists

comp(13502..13987)
DNA (486bp) protein (162aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1355_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(14012..14509)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68059.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14572..16989)
DNA (2418bp) protein (806aa)
ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase; K01007 pyruvate, water dikinase [EC:2.7.9.2] bin=bin3_NC10 species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
phosphoenolpyruvate synthase (EC:2.7.9.2)
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_1355_13
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17097..18107)
DNA (1011bp) protein (337aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
galactose-1-phosphate uridylyltransferase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_65_b1_redo_sep16_scaffold_1355_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(18230..20662)
DNA (2433bp) protein (811aa)
Putative ATP-dependent protease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV7_9BACT
Putative ATP-dependent protease {ECO:0000313|EMBL:CBE68057.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ATP-dependent protease
PLM4_65_b1_redo_sep16_scaffold_1355_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(20956..21519)
DNA (564bp) protein (188aa)
Putative GCN5-related N-acetyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV5_9BACT
GCN5-related N-acetyltransferase
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CBE68055.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(21646..22221)
DNA (576bp) protein (192aa)
GCN5-related N-acetyltransferase bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
GCN5-related N-acetyltransferase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_1355_17
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22320..22790)
DNA (471bp) protein (157aa)
Universal stress protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DK09_SINAD
universal stress protein UspA-like protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_65_b1_redo_sep16_scaffold_1355_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(22849..23199)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68054.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(23196..25952)
DNA (2757bp) protein (919aa)
Calcium-transporting ATPase (EC:3.6.3.8)
Calcium-transporting ATPase {ECO:0000313|EMBL:CBE68053.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CBE68053.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Calcium-transporting ATPase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV3_9BACT
PLM4_65_b1_redo_sep16_scaffold_1355_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(25976..26773)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68052.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26817..28832)
DNA (2016bp) protein (672aa)
Ferrous iron transport protein B bin=GWA2_Methylomirabilis_73_35 species=Methanohalophilus mahii genus=Methanohalophilus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ferrous iron transporter B
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_1355_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(28823..29536)
DNA (714bp) protein (238aa)
FeoA family protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative DtxR family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_1355_23
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29551..30015)
DNA (465bp) protein (155aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Desulfob_01
PLM4_65_b1_redo_sep16_scaffold_1355_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(30219..30557)
DNA (339bp) protein (113aa)
id=14429134 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_1355_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(30734..31378)
DNA (645bp) protein (215aa)
CBS domain containing membrane protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV1_9BACT
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:CBE68051.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_26
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(31401..32606)
DNA (1206bp) protein (402aa)
methionine adenosyltransferase (EC:2.5.1.6)
Methionine adenosyltransferase {ECO:0000313|EMBL:CBE68050.1}; EC=2.5.1.6 {ECO:0000313|EMBL:CBE68050.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Methionine adenosyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV0_9BACT
PLM4_65_b1_redo_sep16_scaffold_1355_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(32619..33137)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMU9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68049.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(33274..33717)
DNA (444bp) protein (148aa)
Putative HspC2 heat shock protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMU8_9BACT
HspC2 heat shock protein
Putative HspC2 heat shock protein {ECO:0000313|EMBL:CBE68048.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(33818..34381)
DNA (564bp) protein (188aa)
Putative GCN5-related N-acetyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMV5_9BACT
GCN5-related N-acetyltransferase
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CBE68055.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_1355_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(34412..34996)
DNA (585bp) protein (195aa)
GCN5-related N-acetyltransferase bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
GCN5-related N-acetyltransferase
Tax=CSP1_5_NC10
Displaying items 1-30 of 46 in total

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