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PLM4_65_b1_redo_sep16_scaffold_2117

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2117_1
CSP1_5_NC10, NC10, Bacteria

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comp(2..256)
DNA (255bp) protein (85aa)
formylmethanofuran dehydrogenase subunit B (EC:1.2.99.5) bin=bin3_NC10 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_2117_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(443..1141)
DNA (699bp) protein (233aa)
cbbE; ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBE67284.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ribulose-phosphate 3-epimerase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000378F09C
PLM4_65_b1_redo_sep16_scaffold_2117_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1153..2217)
DNA (1065bp) protein (355aa)
cbbA; Fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBE67283.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBE67283.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Fructose-bisphosphate aldolase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MID3_9BACT
PLM4_65_b1_redo_sep16_scaffold_2117_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2322..3362)
DNA (1041bp) protein (347aa)
cbbF; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
fructose 1,6-bisphosphatase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036A39EC
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2117_5
unknown

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3572..3670
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_6
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3686..4672)
DNA (987bp) protein (329aa)
Auxin-induced protein PCNT115 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NC83_9BACL
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AFH60450.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
PLM4_65_b1_redo_sep16_scaffold_2117_7
unknown

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comp(4706..5758)
DNA (1053bp) protein (351aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5891..6796)
DNA (906bp) protein (302aa)
putative isocitrate lyase/carboxyphosphonoenolpyruvate phosphonomutase (EC:4.1.3.1)
Uncharacterized protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4KRN1_9DELT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2117_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6965..7627)
DNA (663bp) protein (221aa)
TENA/THI-4 family bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TENA/THI-4 family
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_b1_redo_sep16_scaffold_2117_10
unknown

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comp(7733..8149)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8393..10771
DNA (2379bp) protein (793aa)
Tetratricopeptide TPR_2 repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RN0_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ87690.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_2117_12
CG_Elusi_05, Elusimicrobia, Bacteria

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11073..11354
DNA (282bp) protein (94aa)
Uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=CG_Elusi_05
PLM4_65_b1_redo_sep16_scaffold_2117_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11356..11616
DNA (261bp) protein (87aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_b1_redo_sep16_scaffold_2117_14
unknown

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comp(11861..12805)
DNA (945bp) protein (315aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_15
unknown

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comp(12789..13097)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_16
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13132..13785)
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Desulfovibrio sp. FW1012B RepID=G7QAF4_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
PLM4_65_b1_redo_sep16_scaffold_2117_trna_1
unknown

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comp(13916..13999)
DNA (84bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_2117_17
unknown

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13941..14090
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14134..14685)
DNA (552bp) protein (184aa)
hprT; hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) {ECO:0000313|EMBL:CBE69887.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CBE69887.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML45_9BACT
PLM4_65_b1_redo_sep16_scaffold_2117_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14925..15863)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML44_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69886.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2117_20
unknown

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comp(15935..16351)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(16504..17814)
DNA (1311bp) protein (437aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Citrate synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML43_9BACT
PLM4_65_b1_redo_sep16_scaffold_2117_22
unknown

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comp(17963..18433)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2117_23

Not on your lists

19056..19634
DNA (579bp) protein (193aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B3DF5
HEAT repeats {ECO:0000313|EMBL:AIA11532.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HEAT-like repeat protein
PLM4_65_b1_redo_sep16_scaffold_2117_24
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

19756..21213
DNA (1458bp) protein (486aa)
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
Displaying 25 items

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