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PLM4_65_b1_redo_sep16_scaffold_2157

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2157_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_2157_trna_1
unknown

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comp(435..507)
DNA (73bp)
transferRNA Ala
PLM4_65_b1_redo_sep16_scaffold_2157_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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831..1049
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM75_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67961.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2157_3
CSP1_5_NC10, NC10, Bacteria

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1622..2422
DNA (801bp) protein (267aa)
hypothetical protein bin=bin3_NC10 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
alpha/beta hydrolase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_2157_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2462..3640)
DNA (1179bp) protein (393aa)
Putative transporter, major facilitator family. narK is a member of this family Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMC3_9BACT
transporter, major facilitator family. narK is a member of this family
Putative transporter, major facilitator family. narK is a member of this family {ECO:0000313|EMBL:CBE68009.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2157_5
R_NC10_66_22, NC10, Bacteria

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3831..4439
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQR9_9PLAN
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2157_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4753..7278
DNA (2526bp) protein (842aa)
Putative Histidine kinase {ECO:0000313|EMBL:CBE69170.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBE69170.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHD8_9BACT
PLM4_65_b1_redo_sep16_scaffold_2157_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(7425..9875)
DNA (2451bp) protein (817aa)
Putative Oxygen-independent coproporphyrinogen III oxidase (Modular protein) {ECO:0000313|EMBL:CBE69171.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBE69171.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative Oxygen-independent coproporphyrinogen III oxidase (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHD9_9BACT
PLM4_65_b1_redo_sep16_scaffold_2157_8
R_NC10_66_22, NC10, Bacteria

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10735..12435
DNA (1701bp) protein (567aa)
Multi-sensor signal transduction histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WPG6_GEOS8
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2157_9
R_NC10_66_22, NC10, Bacteria

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12437..13075
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family Tax=Geobacter sp. (strain M18) RepID=E8WPG5_GEOS8
LuxR family two component transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_2157_10
unknown

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comp(12920..13360)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2157_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13491..14330)
DNA (840bp) protein (280aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE0_9BACT
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2157_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(14449..15144)
DNA (696bp) protein (232aa)
cld2; chlorite dismutase (EC:1.13.11.49)
Chlorite dismutase Tax=Candidatus Nitrospira defluvii RepID=D8PHP0_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_65_b1_redo_sep16_scaffold_2157_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15439..15720
DNA (282bp) protein (94aa)
30S ribosomal protein S21 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE2_9BACT
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2157_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15841..16185
DNA (345bp) protein (115aa)
RNP-1 like RNA-binding protein (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE3_9BACT
RNP-1 like RNA-binding protein
RNP-1 like RNA-binding protein (Modular protein) {ECO:0000313|EMBL:CBE69175.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2157_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(16547..17668)
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69177.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_2157_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(17695..18597)
DNA (903bp) protein (301aa)
asrgl; L-asparaginase (Asparaginase-like protein 1) (EC:3.5.1.1)
L-asparaginase (L-asparagine amidohydrolase) (Asparaginase-like protein 1) {ECO:0000313|EMBL:CBE69178.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBE69178.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
L-asparaginase (L-asparagine amidohydrolase) (Asparaginase-like protein 1) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE6_9BACT
PLM4_65_b1_redo_sep16_scaffold_2157_17
CSP1_5_NC10, NC10, Bacteria

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comp(18587..19834)
DNA (1248bp) protein (416aa)
Threonine synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
threonine synthase
Tax=CSP1_5_NC10
PLM4_65_b1_redo_sep16_scaffold_2157_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(19834..21102)
DNA (1269bp) protein (423aa)
metalloprotease (EC:3.4.24.-)
Putative Uncharacterized metalloprotease yhfN (PSP23) {ECO:0000313|EMBL:CBE69179.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBE69179.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Uncharacterized metalloprotease yhfN (PSP23) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE7_9BACT
PLM4_65_b1_redo_sep16_scaffold_2157_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(21134..21595)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHE8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69180.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 20 items

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