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PLM4_65_b1_redo_sep16_scaffold_14770

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_14770_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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2..1345
DNA (1344bp) protein (448aa)
Glycosyl hydrolase Tax=uncultured Acidobacteria bacterium RepID=H5SFE9_9BACT
BNR repeat-containing glycosyl hydrolase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_14770_2
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1421..2377)
DNA (957bp) protein (319aa)
RluA family pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Pseudouridine synthase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3F8_DESAP
PLM4_65_b1_redo_sep16_scaffold_14770_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2374..3159)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037DAF4F
prolipoprotein diacylglyceryl transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_14770_4
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3160..3690)
DNA (531bp) protein (177aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L6F9_9DELT
PLM4_65_b1_redo_sep16_scaffold_14770_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(3687..6626)
DNA (2940bp) protein (980aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIV8_DESPD
PLM4_65_b1_redo_sep16_scaffold_14770_6
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(6688..7071)
DNA (384bp) protein (128aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Holo-[acyl-carrier-protein] synthase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFZ3_THET1
holo-acyl-carrier-protein synthase
PLM4_65_b1_redo_sep16_scaffold_14770_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7076..8521)
DNA (1446bp) protein (482aa)
Potassium efflux system KefA protein {ECO:0000313|EMBL:KFE64883.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
Mechanosensitive ion channel/cyclic nucleotide-binding domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
mechanosensitive ion channel/cyclic nucleotide-binding domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_14770_8
RLO_PLX_64_10, Bacteria

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comp(8518..9129)
DNA (612bp) protein (204aa)
thiamine-phosphate pyrophosphorylase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B0AA
thiamine monophosphate synthase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_14770_9
unknown

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comp(9126..9494)
DNA (369bp) protein (123aa)

This feature has no annotations

Displaying 9 items

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