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PLM4_65_b1_redo_sep16_scaffold_10737

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10737_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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3..152
DNA (150bp) protein (50aa)
glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLI2_CHLTF
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_10737_2
unknown

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comp(434..742)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10737_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(739..1773)
DNA (1035bp) protein (345aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Tax=uncultured prokaryote RepID=H5SKV3_9ZZZZ
Glyoxylate reductase {ECO:0000313|EMBL:KDA52980.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
PLM4_65_b1_redo_sep16_scaffold_10737_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2003..4048)
DNA (2046bp) protein (682aa)
Peptidyl-prolyl cis-trans isomerase ppiA Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=J2AET0_9DELT bin=16ft_combo_ws3_JS1 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cyclophilin type peptidyl-prolyl cis-trans isomerase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_10737_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(4134..4877)
DNA (744bp) protein (248aa)
metallophosphoesterase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
metallophosphoesterase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_10737_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4950..6047)
DNA (1098bp) protein (366aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_10737_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(6113..7456)
DNA (1344bp) protein (448aa)
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
accC; acetyl-CoA carboxylase biotin carboxylase (EC:6.3.4.14)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_10737_8

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comp(7487..7948)
DNA (462bp) protein (154aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=uncultured prokaryote RepID=H5SKV8_9ZZZZ
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:BAL56794.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
PLM4_65_b1_redo_sep16_scaffold_10737_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7952..8314)
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H859_ANADF
Uncharacterized protein {ECO:0000313|EMBL:CDM66210.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_10737_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(8311..9423)
DNA (1113bp) protein (371aa)
Uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tetratricopeptide repeat-containing protein
Tax=RBG_16_Nitrospirae_64_22_curated
Displaying 10 items

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