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PLM4_65_b1_redo_sep16_scaffold_23223

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_23223_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(2..676)
DNA (675bp) protein (225aa)
Clan MH, family M20, peptidase T-like metallopeptidase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_23223_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(690..1847)
DNA (1158bp) protein (386aa)
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain family Tax=Gammaproteobacteria RepID=F4D967_AERVB bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
carbamoyltransferase YgeW, putative
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_23223_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1795..3816)
DNA (2022bp) protein (674aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_23223_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(3813..5027)
DNA (1215bp) protein (405aa)
amidohydrolase bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
amidohydrolase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_65_b1_redo_sep16_scaffold_23223_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(5024..6235)
DNA (1212bp) protein (404aa)
hypothetical protein Tax=Clostridium tunisiense RepID=UPI0002E6CF87
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Chloroflexi_57_9_curated
Displaying 5 items

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