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PLM4_65_b1_redo_sep16_scaffold_3262

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3262_1
unknown

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3..527
DNA (525bp) protein (175aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3262_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(565..1974)
DNA (1410bp) protein (470aa)
capsular polysaccharide synthesis protein (cpsA) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
capsular polysaccharide synthesis protein (cpsA)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1971..3089)
DNA (1119bp) protein (373aa)
Glycosyltransferase bin=GWA2_Ignavibacteria_55_11 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_3262_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3086..4249)
DNA (1164bp) protein (388aa)
glycosyl transferase, group 1 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_3262_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(4246..5364)
DNA (1119bp) protein (373aa)
Glycosyl transferase, family 2 (Modular protein) Tax=mine drainage metagenome RepID=E6QEK0_9ZZZZ
group 1 glycosyl transferase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_6

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5444..5956
DNA (513bp) protein (171aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SKU6_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56782.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3262_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


5964..6137
DNA (174bp) protein (58aa)
50S ribosomal protein L32 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380FA7D
rpmF; 50S ribosomal protein L32
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3262_8
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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6230..7249
DNA (1020bp) protein (340aa)
Fatty acid/phospholipid synthesis protein PlsX Tax=uncultured prokaryote RepID=H5SKU5_9ZZZZ
putative glycerol-3-phosphate acyltransferase PlsX
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_3262_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7259..8242
DNA (984bp) protein (328aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0V9_GEODF
PLM4_65_b1_redo_sep16_scaffold_3262_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

8309..9172
DNA (864bp) protein (288aa)
Malonyl CoA-acyl carrier protein transacylase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF77_MYXSD
malonyl CoA-acyl carrier protein transacylase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_11
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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9169..10113
DNA (945bp) protein (315aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364D718
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABF44619.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM4_65_b1_redo_sep16_scaffold_3262_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10277..11020
DNA (744bp) protein (248aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Holophaga foetida DSM 6591 RepID=H1P0W5_9BACT
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3262_13
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

11118..11357
DNA (240bp) protein (80aa)
Acyl carrier protein Tax=Koribacter versatilis (strain Ellin345) RepID=ACP_KORVE
acpP; acyl carrier protein
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM4_65_b1_redo_sep16_scaffold_3262_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11364..12614
DNA (1251bp) protein (417aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029W5_SOLUE
PLM4_65_b1_redo_sep16_scaffold_3262_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

12628..13413
DNA (786bp) protein (262aa)
Putative electron transfer flavoprotein subunit beta Tax=delta proteobacterium NaphS2 RepID=D8EXB4_9DELT
electron transfer flavoprotein beta-subunit
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_16
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13424..14392
DNA (969bp) protein (323aa)
Electron transfer flavoprotein, alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD69_CHLTF
electron transfer flavoprotein subunit alpha
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

14408..16459
DNA (2052bp) protein (684aa)
Fe-S oxidoreductase bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_3262_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16456..16857
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Bacteria RepID=H0P2N4_9SYNC
slr1391; hypothetical protein
Tax=CG_Anaero_02
PLM4_65_b1_redo_sep16_scaffold_3262_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17022..17519
DNA (498bp) protein (166aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036F594B
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF43179.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 19 items

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