ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_5702

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5702_1
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

3..644
DNA (642bp) protein (214aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDS7_DEFDS
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
PLM4_65_b1_redo_sep16_scaffold_5702_2
unknown

Not on your lists

comp(689..1003)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5702_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..2821)
DNA (1767bp) protein (589aa)
Serine/threonine protein kinase-related protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SW21_PLAL2
Serine/threonine-protein kinase pkn3 {ECO:0000313|EMBL:AKF10553.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
serine/threonine protein kinase-related protein
PLM4_65_b1_redo_sep16_scaffold_5702_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2829..8816
DNA (5988bp) protein (1996aa)
serine/threonine protein kinase (EC:2.7.11.1)
serine/threonine protein kinase bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5702_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8809..9417)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B6B5B6
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_b1_redo_sep16_scaffold_5702_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9725..10021
DNA (297bp) protein (99aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037465AF
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_5702_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10146..10646
DNA (501bp) protein (167aa)
MerR family transcriptional regulator bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
MerR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_5702_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10643..11161
DNA (519bp) protein (173aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027Q9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82748.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_5702_9
unknown

Not on your lists

comp(11220..11801)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5702_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11955..13715)
DNA (1761bp) protein (587aa)
Uncharacterized protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEU9_RHOM4
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5702_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13797..15686
DNA (1890bp) protein (630aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003672976
X-Pro dipeptidyl-peptidase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 11 items

View Taxonomy