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PLM4_65_b1_redo_sep16_scaffold_4277

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4277_1
R_NC10_66_22, NC10, Bacteria

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comp(3..1184)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIL9_SYNFM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_b1_redo_sep16_scaffold_4277_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(1237..1863)
DNA (627bp) protein (209aa)
Putative lipoprotein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEG9_ANADF
putative lipoprotein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_4277_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1970..3190
DNA (1221bp) protein (407aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66422.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4277_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3204..4412
DNA (1209bp) protein (403aa)
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:CDM66423.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CDM66423.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZI8_SOLUE
D-isomer specific 2-hydroxyacid dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_4277_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4423..5541
DNA (1119bp) protein (373aa)
Phosphoserine aminotransferase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
serC; phosphoserine aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_4277_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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5705..6694
DNA (990bp) protein (330aa)
hau:Haur_3362 branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
branched-chain amino acid aminotransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_4277_7
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6691..7809
DNA (1119bp) protein (373aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Tax=GWF1_Xanthomonadales_69_6_curated
PLM4_65_b1_redo_sep16_scaffold_4277_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7817..9286)
DNA (1470bp) protein (490aa)
RND family efflux transporter, MFP subunit Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6F0_DESSD
RND family efflux transporter, MFP subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_4277_9
bacterium UASB270, Bacteria

Not on your lists

comp(9283..10731)
DNA (1449bp) protein (483aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK58109.1}; species="Bacteria.;" source="bacterium UASB270.;"
Outer membrane protein bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
outer membrane efflux protein
PLM4_65_b1_redo_sep16_scaffold_4277_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10739..11962)
DNA (1224bp) protein (408aa)
Macrolide ABC transporter ATP-binding protein Tax=Advenella kashmirensis W13003 RepID=V8QNE6_9BURK
ABC transporter permease
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4277_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11990..13111)
DNA (1122bp) protein (374aa)
PKD domain-containing protein bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
PKD domain-containing protein {ECO:0000313|EMBL:ESP86890.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellensis G22.;"
PLM4_65_b1_redo_sep16_scaffold_4277_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13098..15227)
DNA (2130bp) protein (710aa)
Putative autotransporter protein,putative Ig domain-containing protein Tax=Rhodanobacter denitrificans RepID=M4NAC7_9GAMM
putative autotransporter protein,putative Ig domain-containing protein
Putative autotransporter protein,putative Ig domain-containing protein {ECO:0000313|EMBL:AGG87399.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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