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PLM4_65_b1_redo_sep16_scaffold_4722

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4722_1
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..788
DNA (786bp) protein (262aa)
UvrABC system protein A Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8M4_METEZ
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
PLM4_65_b1_redo_sep16_scaffold_4722_2
unknown

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873..1988
DNA (1116bp) protein (372aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4722_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2047..3423
DNA (1377bp) protein (459aa)
Aromatic amino acid beta-eliminating lyase/threonine aldolase Tax=Caldithrix abyssi DSM 13497 RepID=H1XWV6_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tnaA; tryptophanase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_4722_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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3485..4234
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7VYC4_9BACT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_4722_5
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4231..4452
DNA (222bp) protein (74aa)
Thiamine biosynthesis protein ThiS Tax=Acidocella sp. MX-AZ02 RepID=K5YV66_9PROT
bifunctional sulfur carrier protein/thiazole synthase protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EKM98722.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
PLM4_65_b1_redo_sep16_scaffold_4722_trna_1
unknown

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4519..4591
DNA (73bp)
transferRNA Lys
PLM4_65_b1_redo_sep16_scaffold_4722_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4654..5085
DNA (432bp) protein (144aa)
Response regulator receiver protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H925_ANADF
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABS25221.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_4722_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5147..5512
DNA (366bp) protein (122aa)
Chemotaxis protein CheY Tax=Sorangium cellulosum So0157-2 RepID=S4XP74_SORCE
chemotaxis protein CheY
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_4722_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5502..5912
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WXL5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
PLM4_65_b1_redo_sep16_scaffold_4722_9
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5978..6628)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI00030324F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF06022.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
PLM4_65_b1_redo_sep16_scaffold_4722_10
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6761..7255
DNA (495bp) protein (165aa)
hypothetical protein Tax=Moraxella boevrei RepID=UPI00035CAB05
Uncharacterized protein {ECO:0000313|EMBL:EGK85544.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4722_11
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7381..7524
DNA (144bp) protein (48aa)
Putative uncharacterized protein Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EH87_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ59376.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4722_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7711..9021)
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FA6A5D
Uncharacterized protein {ECO:0000313|EMBL:AID31591.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4722_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9018..10400)
DNA (1383bp) protein (461aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXH9_TRURR
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component {ECO:0000313|EMBL:AHY47273.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM4_65_b1_redo_sep16_scaffold_4722_14
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(10968..11219)
DNA (252bp) protein (84aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:GAL93139.1}; EC=1.4.3.5 {ECO:0000313|EMBL:GAL93139.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-44.;"
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9809 RepID=I4I5Q4_MICAE
putative uncharacterized protein
PLM4_65_b1_redo_sep16_scaffold_4722_15
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11485..11943)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003181523
Membrane protein {ECO:0000313|EMBL:EQB92052.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
Low affinity iron permease
PLM4_65_b1_redo_sep16_scaffold_4722_16
unknown

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comp(11940..12065)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4722_17
unknown

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comp(12249..12674)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4722_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(12686..14476)
DNA (1791bp) protein (597aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU41_KORVE
serine/threonin protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 19 items

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